Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav2Q5R1I9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.72■□□□□ 0.11
Trav2Q5R1I9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav2Q5R1I9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav2Q5R1I9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav2Q5R1I9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav2Q5R1I9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav2Q5R1I9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav2Q5R1I9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trav2Q5R1I9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.71■□□□□ 0.11
Trav2Q5R1I9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.71■□□□□ 0.11
Trav2Q5R1I9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav2Q5R1I9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav2Q5R1I9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav2Q5R1I9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav2Q5R1I9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav2Q5R1I9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav2Q5R1I9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav2Q5R1I9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav2Q5R1I9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav2Q5R1I9 Gm5874-201ENSMUST00000096101 508 ntBASIC15.7■□□□□ 0.1
Trav2Q5R1I9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav2Q5R1I9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav2Q5R1I9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Trav2Q5R1I9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav2Q5R1I9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trav2Q5R1I9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav2Q5R1I9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav2Q5R1I9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav2Q5R1I9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav2Q5R1I9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav2Q5R1I9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav2Q5R1I9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.69■□□□□ 0.1
Trav2Q5R1I9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav2Q5R1I9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.69■□□□□ 0.1
Trav2Q5R1I9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav2Q5R1I9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav2Q5R1I9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Trav2Q5R1I9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav2Q5R1I9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav2Q5R1I9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav2Q5R1I9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav2Q5R1I9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav2Q5R1I9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav2Q5R1I9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav2Q5R1I9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav2Q5R1I9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav2Q5R1I9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
Trav2Q5R1I9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav2Q5R1I9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav2Q5R1I9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Trav2Q5R1I9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav2Q5R1I9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav2Q5R1I9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav2Q5R1I9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav2Q5R1I9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav2Q5R1I9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav2Q5R1I9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav2Q5R1I9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav2Q5R1I9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.67■□□□□ 0.1
Trav2Q5R1I9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav2Q5R1I9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav2Q5R1I9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav2Q5R1I9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav2Q5R1I9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav2Q5R1I9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav2Q5R1I9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav2Q5R1I9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav2Q5R1I9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav2Q5R1I9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav2Q5R1I9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav2Q5R1I9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Trav2Q5R1I9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav2Q5R1I9 Gm10493-201ENSMUST00000097270 612 ntBASIC15.66■□□□□ 0.1
Trav2Q5R1I9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav2Q5R1I9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.66■□□□□ 0.1
Trav2Q5R1I9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav2Q5R1I9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav2Q5R1I9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav2Q5R1I9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Trav2Q5R1I9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav2Q5R1I9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Trav2Q5R1I9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.65■□□□□ 0.1
Trav2Q5R1I9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav2Q5R1I9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav2Q5R1I9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav2Q5R1I9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav2Q5R1I9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav2Q5R1I9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav2Q5R1I9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trav2Q5R1I9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav2Q5R1I9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav2Q5R1I9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trav2Q5R1I9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav2Q5R1I9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav2Q5R1I9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav2Q5R1I9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav2Q5R1I9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav2Q5R1I9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav2Q5R1I9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms