Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.31■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.3■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.26■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.26■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.25■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.24■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms