Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Col27a1Q5QNQ9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col27a1Q5QNQ9 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.53■□□□□ 0.72
Col27a1Q5QNQ9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col27a1Q5QNQ9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col27a1Q5QNQ9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Col27a1Q5QNQ9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col27a1Q5QNQ9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Col27a1Q5QNQ9 Gm27275-201ENSMUST00000184318 272 ntBASIC19.52■□□□□ 0.72
Col27a1Q5QNQ9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Col27a1Q5QNQ9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col27a1Q5QNQ9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col27a1Q5QNQ9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col27a1Q5QNQ9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.51■□□□□ 0.71
Col27a1Q5QNQ9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Col27a1Q5QNQ9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.51■□□□□ 0.71
Col27a1Q5QNQ9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col27a1Q5QNQ9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Col27a1Q5QNQ9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Col27a1Q5QNQ9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.51■□□□□ 0.71
Col27a1Q5QNQ9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col27a1Q5QNQ9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col27a1Q5QNQ9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.51■□□□□ 0.71
Col27a1Q5QNQ9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col27a1Q5QNQ9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col27a1Q5QNQ9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col27a1Q5QNQ9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col27a1Q5QNQ9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col27a1Q5QNQ9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col27a1Q5QNQ9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Col27a1Q5QNQ9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col27a1Q5QNQ9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col27a1Q5QNQ9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col27a1Q5QNQ9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col27a1Q5QNQ9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col27a1Q5QNQ9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col27a1Q5QNQ9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Col27a1Q5QNQ9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col27a1Q5QNQ9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col27a1Q5QNQ9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col27a1Q5QNQ9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col27a1Q5QNQ9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col27a1Q5QNQ9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col27a1Q5QNQ9 Rab3c-203ENSMUST00000224180 967 ntBASIC19.48■□□□□ 0.71
Col27a1Q5QNQ9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.48■□□□□ 0.71
Col27a1Q5QNQ9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Col27a1Q5QNQ9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col27a1Q5QNQ9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col27a1Q5QNQ9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.48■□□□□ 0.71
Col27a1Q5QNQ9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col27a1Q5QNQ9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col27a1Q5QNQ9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Col27a1Q5QNQ9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col27a1Q5QNQ9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col27a1Q5QNQ9 Gm715-201ENSMUST00000117865 831 ntBASIC19.47■□□□□ 0.71
Col27a1Q5QNQ9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col27a1Q5QNQ9 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.47■□□□□ 0.71
Col27a1Q5QNQ9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.47■□□□□ 0.71
Col27a1Q5QNQ9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col27a1Q5QNQ9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col27a1Q5QNQ9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Col27a1Q5QNQ9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.46■□□□□ 0.71
Col27a1Q5QNQ9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Col27a1Q5QNQ9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col27a1Q5QNQ9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col27a1Q5QNQ9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col27a1Q5QNQ9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col27a1Q5QNQ9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col27a1Q5QNQ9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Col27a1Q5QNQ9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col27a1Q5QNQ9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Col27a1Q5QNQ9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col27a1Q5QNQ9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.45■□□□□ 0.7
Col27a1Q5QNQ9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Col27a1Q5QNQ9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col27a1Q5QNQ9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col27a1Q5QNQ9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col27a1Q5QNQ9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col27a1Q5QNQ9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col27a1Q5QNQ9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col27a1Q5QNQ9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.44■□□□□ 0.7
Col27a1Q5QNQ9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Col27a1Q5QNQ9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col27a1Q5QNQ9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col27a1Q5QNQ9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.43■□□□□ 0.7
Col27a1Q5QNQ9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col27a1Q5QNQ9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col27a1Q5QNQ9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col27a1Q5QNQ9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.43■□□□□ 0.7
Col27a1Q5QNQ9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col27a1Q5QNQ9 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.43■□□□□ 0.7
Col27a1Q5QNQ9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col27a1Q5QNQ9 Gm5643-201ENSMUST00000117081 966 ntBASIC19.42■□□□□ 0.7
Col27a1Q5QNQ9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col27a1Q5QNQ9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col27a1Q5QNQ9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col27a1Q5QNQ9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Col27a1Q5QNQ9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Col27a1Q5QNQ9 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.42■□□□□ 0.7
Col27a1Q5QNQ9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms