Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rc3h1Q4VGL6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Rc3h1Q4VGL6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rc3h1Q4VGL6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Rc3h1Q4VGL6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Rc3h1Q4VGL6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rc3h1Q4VGL6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rc3h1Q4VGL6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rc3h1Q4VGL6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rc3h1Q4VGL6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rc3h1Q4VGL6 Gm42642-201ENSMUST00000200683 355 ntBASIC22.91■■□□□ 1.26
Rc3h1Q4VGL6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rc3h1Q4VGL6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rc3h1Q4VGL6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rc3h1Q4VGL6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rc3h1Q4VGL6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rc3h1Q4VGL6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.91■■□□□ 1.26
Rc3h1Q4VGL6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rc3h1Q4VGL6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rc3h1Q4VGL6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Rc3h1Q4VGL6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Rc3h1Q4VGL6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Rc3h1Q4VGL6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Rc3h1Q4VGL6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rc3h1Q4VGL6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC22.9■■□□□ 1.26
Rc3h1Q4VGL6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Rc3h1Q4VGL6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rc3h1Q4VGL6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rc3h1Q4VGL6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC22.9■■□□□ 1.26
Rc3h1Q4VGL6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Rc3h1Q4VGL6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Rc3h1Q4VGL6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Rc3h1Q4VGL6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.26
Rc3h1Q4VGL6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
Rc3h1Q4VGL6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rc3h1Q4VGL6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC22.89■■□□□ 1.25
Rc3h1Q4VGL6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rc3h1Q4VGL6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rc3h1Q4VGL6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rc3h1Q4VGL6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rc3h1Q4VGL6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rc3h1Q4VGL6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rc3h1Q4VGL6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Rc3h1Q4VGL6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rc3h1Q4VGL6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC22.88■■□□□ 1.25
Rc3h1Q4VGL6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Rc3h1Q4VGL6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rc3h1Q4VGL6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Rc3h1Q4VGL6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Rc3h1Q4VGL6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.88■■□□□ 1.25
Rc3h1Q4VGL6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC22.88■■□□□ 1.25
Rc3h1Q4VGL6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rc3h1Q4VGL6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rc3h1Q4VGL6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rc3h1Q4VGL6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22.88■■□□□ 1.25
Rc3h1Q4VGL6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Rc3h1Q4VGL6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Rc3h1Q4VGL6 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.87■■□□□ 1.25
Rc3h1Q4VGL6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rc3h1Q4VGL6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Rc3h1Q4VGL6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rc3h1Q4VGL6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rc3h1Q4VGL6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rc3h1Q4VGL6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.86■■□□□ 1.25
Rc3h1Q4VGL6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
Rc3h1Q4VGL6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Rc3h1Q4VGL6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rc3h1Q4VGL6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rc3h1Q4VGL6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rc3h1Q4VGL6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.85■■□□□ 1.25
Rc3h1Q4VGL6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.85■■□□□ 1.25
Rc3h1Q4VGL6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rc3h1Q4VGL6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rc3h1Q4VGL6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rc3h1Q4VGL6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.85■■□□□ 1.25
Rc3h1Q4VGL6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC22.85■■□□□ 1.25
Rc3h1Q4VGL6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rc3h1Q4VGL6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rc3h1Q4VGL6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rc3h1Q4VGL6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Rc3h1Q4VGL6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Rc3h1Q4VGL6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rc3h1Q4VGL6 Gm10849-201ENSMUST00000100397 618 ntBASIC22.84■■□□□ 1.25
Rc3h1Q4VGL6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Rc3h1Q4VGL6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rc3h1Q4VGL6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Rc3h1Q4VGL6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Rc3h1Q4VGL6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rc3h1Q4VGL6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rc3h1Q4VGL6 Gm10571-201ENSMUST00000097869 1638 ntBASIC22.83■■□□□ 1.25
Rc3h1Q4VGL6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rc3h1Q4VGL6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Rc3h1Q4VGL6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Rc3h1Q4VGL6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rc3h1Q4VGL6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rc3h1Q4VGL6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.82■■□□□ 1.24
Rc3h1Q4VGL6 Gm42569-201ENSMUST00000200539 472 ntBASIC22.82■■□□□ 1.24
Rc3h1Q4VGL6 Gm10033-202ENSMUST00000211874 928 ntBASIC22.82■■□□□ 1.24
Rc3h1Q4VGL6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rc3h1Q4VGL6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms