Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
Pds5bQ4VA53 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
Pds5bQ4VA53 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
Pds5bQ4VA53 Gm15565-201ENSMUST00000118890 427 ntBASIC35.3■■■■□ 3.24
Pds5bQ4VA53 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
Pds5bQ4VA53 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC35.3■■■■□ 3.24
Pds5bQ4VA53 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Pds5bQ4VA53 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC35.29■■■■□ 3.24
Pds5bQ4VA53 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC35.29■■■■□ 3.24
Pds5bQ4VA53 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Pds5bQ4VA53 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Pds5bQ4VA53 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC35.27■■■■□ 3.24
Pds5bQ4VA53 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
Pds5bQ4VA53 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
Pds5bQ4VA53 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
Pds5bQ4VA53 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC35.26■■■■□ 3.24
Pds5bQ4VA53 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC35.26■■■■□ 3.24
Pds5bQ4VA53 AL672049.1-201ENSMUST00000197943 91 ntBASIC35.26■■■■□ 3.24
Pds5bQ4VA53 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC35.26■■■■□ 3.24
Pds5bQ4VA53 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
Pds5bQ4VA53 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Pds5bQ4VA53 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
Pds5bQ4VA53 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Pds5bQ4VA53 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC35.25■■■■□ 3.23
Pds5bQ4VA53 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Pds5bQ4VA53 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Pds5bQ4VA53 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC35.24■■■■□ 3.23
Pds5bQ4VA53 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC35.24■■■■□ 3.23
Pds5bQ4VA53 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Pds5bQ4VA53 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC35.23■■■■□ 3.23
Pds5bQ4VA53 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Pds5bQ4VA53 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC35.23■■■■□ 3.23
Pds5bQ4VA53 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
Pds5bQ4VA53 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC35.22■■■■□ 3.23
Pds5bQ4VA53 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC35.22■■■■□ 3.23
Pds5bQ4VA53 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
Pds5bQ4VA53 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC35.22■■■■□ 3.23
Pds5bQ4VA53 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC35.22■■■■□ 3.23
Pds5bQ4VA53 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC35.21■■■■□ 3.23
Pds5bQ4VA53 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC35.21■■■■□ 3.23
Pds5bQ4VA53 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
Pds5bQ4VA53 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC35.2■■■■□ 3.23
Pds5bQ4VA53 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC35.2■■■■□ 3.22
Pds5bQ4VA53 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC35.19■■■■□ 3.22
Pds5bQ4VA53 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC35.19■■■■□ 3.22
Pds5bQ4VA53 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
Pds5bQ4VA53 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
Pds5bQ4VA53 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC35.18■■■■□ 3.22
Pds5bQ4VA53 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC35.18■■■■□ 3.22
Pds5bQ4VA53 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
Pds5bQ4VA53 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC35.17■■■■□ 3.22
Pds5bQ4VA53 Gm12896-201ENSMUST00000118430 226 ntBASIC35.17■■■■□ 3.22
Pds5bQ4VA53 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
Pds5bQ4VA53 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Pds5bQ4VA53 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Pds5bQ4VA53 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Pds5bQ4VA53 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC35.16■■■■□ 3.22
Pds5bQ4VA53 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Pds5bQ4VA53 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Pds5bQ4VA53 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC35.16■■■■□ 3.22
Pds5bQ4VA53 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC35.16■■■■□ 3.22
Pds5bQ4VA53 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
Pds5bQ4VA53 Gm37563-201ENSMUST00000192580 1513 ntBASIC35.16■■■■□ 3.22
Pds5bQ4VA53 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC35.16■■■■□ 3.22
Pds5bQ4VA53 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC35.16■■■■□ 3.22
Pds5bQ4VA53 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Pds5bQ4VA53 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
Pds5bQ4VA53 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Pds5bQ4VA53 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
Pds5bQ4VA53 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC35.15■■■■□ 3.22
Pds5bQ4VA53 Gm9484-201ENSMUST00000195892 1159 ntBASIC35.15■■■■□ 3.22
Pds5bQ4VA53 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC35.14■■■■□ 3.22
Pds5bQ4VA53 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
Pds5bQ4VA53 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC35.13■■■■□ 3.21
Pds5bQ4VA53 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
Pds5bQ4VA53 Gm37055-201ENSMUST00000191866 133 ntBASIC35.13■■■■□ 3.21
Pds5bQ4VA53 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
Pds5bQ4VA53 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC35.13■■■■□ 3.21
Pds5bQ4VA53 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC35.13■■■■□ 3.21
Pds5bQ4VA53 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
Pds5bQ4VA53 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Pds5bQ4VA53 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC35.12■■■■□ 3.21
Pds5bQ4VA53 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC35.12■■■■□ 3.21
Pds5bQ4VA53 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC35.11■■■■□ 3.21
Pds5bQ4VA53 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
Pds5bQ4VA53 AC121577.1-201ENSMUST00000227302 707 ntBASIC35.1■■■■□ 3.21
Pds5bQ4VA53 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
Pds5bQ4VA53 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
Pds5bQ4VA53 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC35.09■■■■□ 3.21
Pds5bQ4VA53 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
Pds5bQ4VA53 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC35.08■■■■□ 3.21
Pds5bQ4VA53 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC35.08■■■■□ 3.21
Pds5bQ4VA53 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
Pds5bQ4VA53 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
Pds5bQ4VA53 AC154649.1-201ENSMUST00000227392 384 ntBASIC35.06■■■■□ 3.2
Pds5bQ4VA53 Gm5913-201ENSMUST00000119397 1399 ntBASIC35.06■■■■□ 3.2
Pds5bQ4VA53 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Pds5bQ4VA53 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC35.06■■■■□ 3.2
Pds5bQ4VA53 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC35.06■■■■□ 3.2
Pds5bQ4VA53 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms