Protein–RNA interactions for Protein: Q3V053

4933427I04Rik, Riken cDNA 4933427I04 gene, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933427I04RikQ3V053 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
4933427I04RikQ3V053 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
4933427I04RikQ3V053 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
4933427I04RikQ3V053 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
4933427I04RikQ3V053 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
4933427I04RikQ3V053 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
4933427I04RikQ3V053 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
4933427I04RikQ3V053 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
4933427I04RikQ3V053 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
4933427I04RikQ3V053 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
4933427I04RikQ3V053 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
4933427I04RikQ3V053 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.95■■□□□ 1.1
4933427I04RikQ3V053 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.95■■□□□ 1.1
4933427I04RikQ3V053 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
4933427I04RikQ3V053 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
4933427I04RikQ3V053 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.94■■□□□ 1.1
4933427I04RikQ3V053 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
4933427I04RikQ3V053 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
4933427I04RikQ3V053 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
4933427I04RikQ3V053 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
4933427I04RikQ3V053 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
4933427I04RikQ3V053 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
4933427I04RikQ3V053 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
4933427I04RikQ3V053 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
4933427I04RikQ3V053 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
4933427I04RikQ3V053 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
4933427I04RikQ3V053 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
4933427I04RikQ3V053 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
4933427I04RikQ3V053 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.93■■□□□ 1.1
4933427I04RikQ3V053 Gm27801-201ENSMUST00000184174 223 ntBASIC21.93■■□□□ 1.1
4933427I04RikQ3V053 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
4933427I04RikQ3V053 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
4933427I04RikQ3V053 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
4933427I04RikQ3V053 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
4933427I04RikQ3V053 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
4933427I04RikQ3V053 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
4933427I04RikQ3V053 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
4933427I04RikQ3V053 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
4933427I04RikQ3V053 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.92■■□□□ 1.1
4933427I04RikQ3V053 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
4933427I04RikQ3V053 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
4933427I04RikQ3V053 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
4933427I04RikQ3V053 AA386476-201ENSMUST00000098781 1665 ntBASIC21.91■■□□□ 1.1
4933427I04RikQ3V053 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
4933427I04RikQ3V053 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
4933427I04RikQ3V053 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
4933427I04RikQ3V053 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
4933427I04RikQ3V053 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
4933427I04RikQ3V053 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
4933427I04RikQ3V053 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.91■■□□□ 1.1
4933427I04RikQ3V053 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
4933427I04RikQ3V053 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
4933427I04RikQ3V053 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
4933427I04RikQ3V053 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
4933427I04RikQ3V053 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
4933427I04RikQ3V053 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
4933427I04RikQ3V053 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.9■■□□□ 1.1
4933427I04RikQ3V053 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.9■■□□□ 1.1
4933427I04RikQ3V053 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.9■■□□□ 1.1
4933427I04RikQ3V053 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
4933427I04RikQ3V053 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
4933427I04RikQ3V053 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.9■■□□□ 1.1
4933427I04RikQ3V053 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
4933427I04RikQ3V053 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
4933427I04RikQ3V053 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
4933427I04RikQ3V053 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.9■■□□□ 1.1
4933427I04RikQ3V053 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
4933427I04RikQ3V053 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
4933427I04RikQ3V053 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
4933427I04RikQ3V053 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
4933427I04RikQ3V053 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.89■■□□□ 1.09
4933427I04RikQ3V053 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
4933427I04RikQ3V053 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.89■■□□□ 1.09
4933427I04RikQ3V053 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
4933427I04RikQ3V053 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
4933427I04RikQ3V053 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
4933427I04RikQ3V053 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
4933427I04RikQ3V053 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
4933427I04RikQ3V053 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
4933427I04RikQ3V053 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.88■■□□□ 1.09
4933427I04RikQ3V053 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.88■■□□□ 1.09
4933427I04RikQ3V053 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
4933427I04RikQ3V053 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
4933427I04RikQ3V053 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
4933427I04RikQ3V053 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.87■■□□□ 1.09
4933427I04RikQ3V053 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
4933427I04RikQ3V053 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
4933427I04RikQ3V053 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
4933427I04RikQ3V053 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
4933427I04RikQ3V053 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
4933427I04RikQ3V053 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
4933427I04RikQ3V053 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.87■■□□□ 1.09
4933427I04RikQ3V053 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
4933427I04RikQ3V053 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.86■■□□□ 1.09
4933427I04RikQ3V053 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.86■■□□□ 1.09
4933427I04RikQ3V053 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
4933427I04RikQ3V053 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.86■■□□□ 1.09
4933427I04RikQ3V053 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
4933427I04RikQ3V053 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
4933427I04RikQ3V053 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms