Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf223Q3UV31 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf223Q3UV31 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf223Q3UV31 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf223Q3UV31 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf223Q3UV31 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf223Q3UV31 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf223Q3UV31 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf223Q3UV31 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf223Q3UV31 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf223Q3UV31 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.23■□□□□ 0.67
Rnf223Q3UV31 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf223Q3UV31 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf223Q3UV31 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rnf223Q3UV31 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf223Q3UV31 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf223Q3UV31 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf223Q3UV31 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Rnf223Q3UV31 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf223Q3UV31 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf223Q3UV31 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.22■□□□□ 0.67
Rnf223Q3UV31 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf223Q3UV31 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf223Q3UV31 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf223Q3UV31 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf223Q3UV31 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf223Q3UV31 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf223Q3UV31 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf223Q3UV31 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.21■□□□□ 0.67
Rnf223Q3UV31 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rnf223Q3UV31 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rnf223Q3UV31 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf223Q3UV31 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf223Q3UV31 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf223Q3UV31 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rnf223Q3UV31 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf223Q3UV31 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf223Q3UV31 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.2■□□□□ 0.66
Rnf223Q3UV31 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.2■□□□□ 0.66
Rnf223Q3UV31 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.2■□□□□ 0.66
Rnf223Q3UV31 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf223Q3UV31 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.2■□□□□ 0.66
Rnf223Q3UV31 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.2■□□□□ 0.66
Rnf223Q3UV31 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf223Q3UV31 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf223Q3UV31 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf223Q3UV31 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.19■□□□□ 0.66
Rnf223Q3UV31 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf223Q3UV31 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.19■□□□□ 0.66
Rnf223Q3UV31 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.19■□□□□ 0.66
Rnf223Q3UV31 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.19■□□□□ 0.66
Rnf223Q3UV31 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf223Q3UV31 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
Rnf223Q3UV31 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.19■□□□□ 0.66
Rnf223Q3UV31 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Rnf223Q3UV31 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf223Q3UV31 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf223Q3UV31 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rnf223Q3UV31 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf223Q3UV31 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Rnf223Q3UV31 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.18■□□□□ 0.66
Rnf223Q3UV31 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf223Q3UV31 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf223Q3UV31 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rnf223Q3UV31 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.18■□□□□ 0.66
Rnf223Q3UV31 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf223Q3UV31 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf223Q3UV31 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf223Q3UV31 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.17■□□□□ 0.66
Rnf223Q3UV31 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf223Q3UV31 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf223Q3UV31 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf223Q3UV31 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf223Q3UV31 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf223Q3UV31 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf223Q3UV31 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf223Q3UV31 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Rnf223Q3UV31 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf223Q3UV31 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.16■□□□□ 0.66
Rnf223Q3UV31 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.16■□□□□ 0.66
Rnf223Q3UV31 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf223Q3UV31 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf223Q3UV31 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf223Q3UV31 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf223Q3UV31 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Rnf223Q3UV31 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Rnf223Q3UV31 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf223Q3UV31 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf223Q3UV31 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf223Q3UV31 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf223Q3UV31 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.15■□□□□ 0.66
Rnf223Q3UV31 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Rnf223Q3UV31 Gm26571-201ENSMUST00000181399 666 ntBASIC19.15■□□□□ 0.66
Rnf223Q3UV31 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf223Q3UV31 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Rnf223Q3UV31 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf223Q3UV31 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rnf223Q3UV31 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Rnf223Q3UV31 Gm27801-201ENSMUST00000184174 223 ntBASIC19.14■□□□□ 0.65
Rnf223Q3UV31 Gm42642-201ENSMUST00000200683 355 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms