Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Zfp560Q3URI6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Zfp560Q3URI6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Zfp560Q3URI6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Zfp560Q3URI6 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.76■□□□□ 0.75
Zfp560Q3URI6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Zfp560Q3URI6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Zfp560Q3URI6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Zfp560Q3URI6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Zfp560Q3URI6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Zfp560Q3URI6 Mir7075-201ENSMUST00000184187 82 ntBASIC19.76■□□□□ 0.75
Zfp560Q3URI6 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.76■□□□□ 0.75
Zfp560Q3URI6 Gm45417-201ENSMUST00000209533 758 ntBASIC19.76■□□□□ 0.75
Zfp560Q3URI6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Zfp560Q3URI6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Zfp560Q3URI6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Zfp560Q3URI6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Zfp560Q3URI6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Zfp560Q3URI6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Zfp560Q3URI6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Zfp560Q3URI6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Zfp560Q3URI6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Zfp560Q3URI6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Zfp560Q3URI6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Zfp560Q3URI6 Spcs1-204ENSMUST00000226782 949 ntBASIC19.74■□□□□ 0.75
Zfp560Q3URI6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Zfp560Q3URI6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Zfp560Q3URI6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Zfp560Q3URI6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Zfp560Q3URI6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Zfp560Q3URI6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Zfp560Q3URI6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Zfp560Q3URI6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Zfp560Q3URI6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Zfp560Q3URI6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Zfp560Q3URI6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Zfp560Q3URI6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Zfp560Q3URI6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Zfp560Q3URI6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Zfp560Q3URI6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Zfp560Q3URI6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Zfp560Q3URI6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Zfp560Q3URI6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Zfp560Q3URI6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Zfp560Q3URI6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Zfp560Q3URI6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Zfp560Q3URI6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Zfp560Q3URI6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Zfp560Q3URI6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Zfp560Q3URI6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Zfp560Q3URI6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Zfp560Q3URI6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Zfp560Q3URI6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Zfp560Q3URI6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.72■□□□□ 0.75
Zfp560Q3URI6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Zfp560Q3URI6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Zfp560Q3URI6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Zfp560Q3URI6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Zfp560Q3URI6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Zfp560Q3URI6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Zfp560Q3URI6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Zfp560Q3URI6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Zfp560Q3URI6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Zfp560Q3URI6 Gm12251-201ENSMUST00000117893 792 ntBASIC19.71■□□□□ 0.75
Zfp560Q3URI6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Zfp560Q3URI6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Zfp560Q3URI6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Zfp560Q3URI6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Zfp560Q3URI6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.71■□□□□ 0.75
Zfp560Q3URI6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Zfp560Q3URI6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Zfp560Q3URI6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Zfp560Q3URI6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Zfp560Q3URI6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Zfp560Q3URI6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Zfp560Q3URI6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Zfp560Q3URI6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Zfp560Q3URI6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Zfp560Q3URI6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Zfp560Q3URI6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Zfp560Q3URI6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Zfp560Q3URI6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Zfp560Q3URI6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Zfp560Q3URI6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Zfp560Q3URI6 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.7■□□□□ 0.74
Zfp560Q3URI6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.7■□□□□ 0.74
Zfp560Q3URI6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.7■□□□□ 0.74
Zfp560Q3URI6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Zfp560Q3URI6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.7■□□□□ 0.74
Zfp560Q3URI6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Zfp560Q3URI6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Zfp560Q3URI6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Zfp560Q3URI6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.69■□□□□ 0.74
Zfp560Q3URI6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Zfp560Q3URI6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Zfp560Q3URI6 Gm8493-201ENSMUST00000196881 489 ntBASIC19.69■□□□□ 0.74
Zfp560Q3URI6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Zfp560Q3URI6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.69■□□□□ 0.74
Zfp560Q3URI6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Zfp560Q3URI6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms