Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smu1Q3UKJ7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Smu1Q3UKJ7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smu1Q3UKJ7 Etf1-202ENSMUST00000180351 108 ntBASIC18.89■□□□□ 0.61
Smu1Q3UKJ7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Smu1Q3UKJ7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smu1Q3UKJ7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Smu1Q3UKJ7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Smu1Q3UKJ7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smu1Q3UKJ7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smu1Q3UKJ7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.88■□□□□ 0.61
Smu1Q3UKJ7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Smu1Q3UKJ7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smu1Q3UKJ7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smu1Q3UKJ7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smu1Q3UKJ7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smu1Q3UKJ7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Smu1Q3UKJ7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Smu1Q3UKJ7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Smu1Q3UKJ7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.88■□□□□ 0.61
Smu1Q3UKJ7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smu1Q3UKJ7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smu1Q3UKJ7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.87■□□□□ 0.61
Smu1Q3UKJ7 Gm15820-201ENSMUST00000201566 728 ntBASIC18.87■□□□□ 0.61
Smu1Q3UKJ7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
Smu1Q3UKJ7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smu1Q3UKJ7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smu1Q3UKJ7 Gm5812-201ENSMUST00000061073 957 ntBASIC18.87■□□□□ 0.61
Smu1Q3UKJ7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smu1Q3UKJ7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.86■□□□□ 0.61
Smu1Q3UKJ7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.86■□□□□ 0.61
Smu1Q3UKJ7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smu1Q3UKJ7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smu1Q3UKJ7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smu1Q3UKJ7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smu1Q3UKJ7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smu1Q3UKJ7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smu1Q3UKJ7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smu1Q3UKJ7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Smu1Q3UKJ7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
Smu1Q3UKJ7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smu1Q3UKJ7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smu1Q3UKJ7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Smu1Q3UKJ7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Smu1Q3UKJ7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smu1Q3UKJ7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.85■□□□□ 0.61
Smu1Q3UKJ7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smu1Q3UKJ7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smu1Q3UKJ7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smu1Q3UKJ7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smu1Q3UKJ7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smu1Q3UKJ7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smu1Q3UKJ7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smu1Q3UKJ7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smu1Q3UKJ7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Smu1Q3UKJ7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smu1Q3UKJ7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smu1Q3UKJ7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smu1Q3UKJ7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smu1Q3UKJ7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Smu1Q3UKJ7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smu1Q3UKJ7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smu1Q3UKJ7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.83■□□□□ 0.61
Smu1Q3UKJ7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smu1Q3UKJ7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.83■□□□□ 0.61
Smu1Q3UKJ7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smu1Q3UKJ7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.83■□□□□ 0.6
Smu1Q3UKJ7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smu1Q3UKJ7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smu1Q3UKJ7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smu1Q3UKJ7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smu1Q3UKJ7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smu1Q3UKJ7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smu1Q3UKJ7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smu1Q3UKJ7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smu1Q3UKJ7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Smu1Q3UKJ7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smu1Q3UKJ7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smu1Q3UKJ7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smu1Q3UKJ7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smu1Q3UKJ7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smu1Q3UKJ7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smu1Q3UKJ7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smu1Q3UKJ7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.81■□□□□ 0.6
Smu1Q3UKJ7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smu1Q3UKJ7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smu1Q3UKJ7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smu1Q3UKJ7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smu1Q3UKJ7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smu1Q3UKJ7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smu1Q3UKJ7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smu1Q3UKJ7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smu1Q3UKJ7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smu1Q3UKJ7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smu1Q3UKJ7 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.81■□□□□ 0.6
Smu1Q3UKJ7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smu1Q3UKJ7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smu1Q3UKJ7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.8■□□□□ 0.6
Smu1Q3UKJ7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smu1Q3UKJ7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms