Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Spg11Q3UHA3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Spg11Q3UHA3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Spg11Q3UHA3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Spg11Q3UHA3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.57■□□□□ 0.56
Spg11Q3UHA3 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.57■□□□□ 0.56
Spg11Q3UHA3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Spg11Q3UHA3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Spg11Q3UHA3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Spg11Q3UHA3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.57■□□□□ 0.56
Spg11Q3UHA3 Gm10517-202ENSMUST00000192970 758 ntBASIC18.57■□□□□ 0.56
Spg11Q3UHA3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Spg11Q3UHA3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Spg11Q3UHA3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Spg11Q3UHA3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.56■□□□□ 0.56
Spg11Q3UHA3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Spg11Q3UHA3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Spg11Q3UHA3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Spg11Q3UHA3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.56■□□□□ 0.56
Spg11Q3UHA3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Spg11Q3UHA3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Spg11Q3UHA3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Spg11Q3UHA3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Spg11Q3UHA3 Gm25925-201ENSMUST00000158314 306 ntBASIC18.55■□□□□ 0.56
Spg11Q3UHA3 Dio3-201ENSMUST00000097228 1449 ntBASIC18.55■□□□□ 0.56
Spg11Q3UHA3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Spg11Q3UHA3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.55■□□□□ 0.56
Spg11Q3UHA3 Gm43799-201ENSMUST00000201845 579 ntBASIC18.55■□□□□ 0.56
Spg11Q3UHA3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Spg11Q3UHA3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Spg11Q3UHA3 Gm13534-201ENSMUST00000121169 513 ntBASIC18.54■□□□□ 0.56
Spg11Q3UHA3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Spg11Q3UHA3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Spg11Q3UHA3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Spg11Q3UHA3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Spg11Q3UHA3 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.53■□□□□ 0.56
Spg11Q3UHA3 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.53■□□□□ 0.56
Spg11Q3UHA3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.53■□□□□ 0.56
Spg11Q3UHA3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Spg11Q3UHA3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Spg11Q3UHA3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.53■□□□□ 0.56
Spg11Q3UHA3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Spg11Q3UHA3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.53■□□□□ 0.56
Spg11Q3UHA3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Spg11Q3UHA3 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.52■□□□□ 0.55
Spg11Q3UHA3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
Spg11Q3UHA3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Spg11Q3UHA3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.52■□□□□ 0.55
Spg11Q3UHA3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Spg11Q3UHA3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Spg11Q3UHA3 Mir5122-201ENSMUST00000175004 89 ntBASIC18.51■□□□□ 0.55
Spg11Q3UHA3 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.51■□□□□ 0.55
Spg11Q3UHA3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Spg11Q3UHA3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Spg11Q3UHA3 Gm12896-201ENSMUST00000118430 226 ntBASIC18.51■□□□□ 0.55
Spg11Q3UHA3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Spg11Q3UHA3 Rab3c-203ENSMUST00000224180 967 ntBASIC18.51■□□□□ 0.55
Spg11Q3UHA3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Spg11Q3UHA3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Spg11Q3UHA3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Spg11Q3UHA3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Spg11Q3UHA3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Spg11Q3UHA3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Spg11Q3UHA3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Spg11Q3UHA3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Spg11Q3UHA3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Spg11Q3UHA3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.5■□□□□ 0.55
Spg11Q3UHA3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Spg11Q3UHA3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Spg11Q3UHA3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Spg11Q3UHA3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Spg11Q3UHA3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Spg11Q3UHA3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Spg11Q3UHA3 Mir1199-201ENSMUST00000117015 119 ntBASIC18.49■□□□□ 0.55
Spg11Q3UHA3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Spg11Q3UHA3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Spg11Q3UHA3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Spg11Q3UHA3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Spg11Q3UHA3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Spg11Q3UHA3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Spg11Q3UHA3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.48■□□□□ 0.55
Spg11Q3UHA3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Spg11Q3UHA3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Spg11Q3UHA3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Spg11Q3UHA3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.48■□□□□ 0.55
Spg11Q3UHA3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Spg11Q3UHA3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Spg11Q3UHA3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Spg11Q3UHA3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Spg11Q3UHA3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Spg11Q3UHA3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.47■□□□□ 0.55
Spg11Q3UHA3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Spg11Q3UHA3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Spg11Q3UHA3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Spg11Q3UHA3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.47■□□□□ 0.55
Spg11Q3UHA3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Spg11Q3UHA3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Spg11Q3UHA3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Spg11Q3UHA3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.47■□□□□ 0.55
Spg11Q3UHA3 Gm6659-201ENSMUST00000174752 547 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms