Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Q3U1D9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.15■□□□□ 0.34
Q3U1D9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Q3U1D9 Gm42642-201ENSMUST00000200683 355 ntBASIC17.15■□□□□ 0.34
Q3U1D9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q3U1D9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q3U1D9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q3U1D9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q3U1D9 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.15■□□□□ 0.34
Q3U1D9 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.14■□□□□ 0.33
Q3U1D9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Q3U1D9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3U1D9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Q3U1D9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Q3U1D9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3U1D9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3U1D9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3U1D9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q3U1D9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q3U1D9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Q3U1D9 Gm42569-201ENSMUST00000200539 472 ntBASIC17.13■□□□□ 0.33
Q3U1D9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q3U1D9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q3U1D9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q3U1D9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q3U1D9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.13■□□□□ 0.33
Q3U1D9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q3U1D9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q3U1D9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q3U1D9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Q3U1D9 Gm42778-201ENSMUST00000199644 553 ntBASIC17.12■□□□□ 0.33
Q3U1D9 Gm18671-201ENSMUST00000214826 683 ntBASIC17.12■□□□□ 0.33
Q3U1D9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q3U1D9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q3U1D9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q3U1D9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q3U1D9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3U1D9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3U1D9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3U1D9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3U1D9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3U1D9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.11■□□□□ 0.33
Q3U1D9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.11■□□□□ 0.33
Q3U1D9 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.11■□□□□ 0.33
Q3U1D9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3U1D9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q3U1D9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3U1D9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3U1D9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q3U1D9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Q3U1D9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Q3U1D9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q3U1D9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q3U1D9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.1■□□□□ 0.33
Q3U1D9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.1■□□□□ 0.33
Q3U1D9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q3U1D9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q3U1D9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q3U1D9 Gm27801-201ENSMUST00000184174 223 ntBASIC17.09■□□□□ 0.33
Q3U1D9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Q3U1D9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q3U1D9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q3U1D9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.09■□□□□ 0.33
Q3U1D9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q3U1D9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q3U1D9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q3U1D9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Q3U1D9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Q3U1D9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Q3U1D9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q3U1D9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.08■□□□□ 0.32
Q3U1D9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Q3U1D9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q3U1D9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Q3U1D9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3U1D9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Q3U1D9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.07■□□□□ 0.32
Q3U1D9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3U1D9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3U1D9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.07■□□□□ 0.32
Q3U1D9 Gm7291-201ENSMUST00000199147 382 ntBASIC17.07■□□□□ 0.32
Q3U1D9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3U1D9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3U1D9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Q3U1D9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Q3U1D9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3U1D9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3U1D9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q3U1D9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q3U1D9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Q3U1D9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q3U1D9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q3U1D9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.06■□□□□ 0.32
Q3U1D9 Gm27405-201ENSMUST00000184201 112 ntBASIC17.06■□□□□ 0.32
Q3U1D9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.06■□□□□ 0.32
Q3U1D9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.06■□□□□ 0.32
Q3U1D9 Gm9988-201ENSMUST00000069786 435 ntBASIC17.06■□□□□ 0.32
Q3U1D9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Q3U1D9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q3U1D9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 293.8 ms