Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fndc4Q3TR08 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fndc4Q3TR08 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Fndc4Q3TR08 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fndc4Q3TR08 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fndc4Q3TR08 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fndc4Q3TR08 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Fndc4Q3TR08 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Fndc4Q3TR08 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Fndc4Q3TR08 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Fndc4Q3TR08 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Fndc4Q3TR08 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Fndc4Q3TR08 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Fndc4Q3TR08 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Fndc4Q3TR08 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Fndc4Q3TR08 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Fndc4Q3TR08 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Fndc4Q3TR08 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.71■□□□□ 0.27
Fndc4Q3TR08 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.71■□□□□ 0.27
Fndc4Q3TR08 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Fndc4Q3TR08 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.7■□□□□ 0.26
Fndc4Q3TR08 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fndc4Q3TR08 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fndc4Q3TR08 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fndc4Q3TR08 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fndc4Q3TR08 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.7■□□□□ 0.26
Fndc4Q3TR08 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fndc4Q3TR08 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fndc4Q3TR08 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fndc4Q3TR08 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fndc4Q3TR08 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fndc4Q3TR08 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fndc4Q3TR08 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fndc4Q3TR08 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fndc4Q3TR08 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fndc4Q3TR08 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fndc4Q3TR08 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fndc4Q3TR08 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.69■□□□□ 0.26
Fndc4Q3TR08 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.69■□□□□ 0.26
Fndc4Q3TR08 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.69■□□□□ 0.26
Fndc4Q3TR08 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fndc4Q3TR08 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fndc4Q3TR08 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fndc4Q3TR08 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fndc4Q3TR08 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fndc4Q3TR08 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Fndc4Q3TR08 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.68■□□□□ 0.26
Fndc4Q3TR08 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Fndc4Q3TR08 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fndc4Q3TR08 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fndc4Q3TR08 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fndc4Q3TR08 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Fndc4Q3TR08 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Fndc4Q3TR08 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.68■□□□□ 0.26
Fndc4Q3TR08 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fndc4Q3TR08 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Fndc4Q3TR08 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fndc4Q3TR08 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fndc4Q3TR08 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Fndc4Q3TR08 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fndc4Q3TR08 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fndc4Q3TR08 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fndc4Q3TR08 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fndc4Q3TR08 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fndc4Q3TR08 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.66■□□□□ 0.26
Fndc4Q3TR08 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fndc4Q3TR08 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fndc4Q3TR08 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fndc4Q3TR08 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.66■□□□□ 0.26
Fndc4Q3TR08 Gm9959-201ENSMUST00000068277 390 ntBASIC16.66■□□□□ 0.26
Fndc4Q3TR08 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fndc4Q3TR08 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Fndc4Q3TR08 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fndc4Q3TR08 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fndc4Q3TR08 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.65■□□□□ 0.26
Fndc4Q3TR08 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fndc4Q3TR08 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.65■□□□□ 0.26
Fndc4Q3TR08 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fndc4Q3TR08 Etf1-202ENSMUST00000180351 108 ntBASIC16.65■□□□□ 0.26
Fndc4Q3TR08 Gm7417-201ENSMUST00000192950 473 ntBASIC16.65■□□□□ 0.26
Fndc4Q3TR08 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Fndc4Q3TR08 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fndc4Q3TR08 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Fndc4Q3TR08 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fndc4Q3TR08 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.64■□□□□ 0.25
Fndc4Q3TR08 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fndc4Q3TR08 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
Fndc4Q3TR08 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Fndc4Q3TR08 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fndc4Q3TR08 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Fndc4Q3TR08 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fndc4Q3TR08 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fndc4Q3TR08 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fndc4Q3TR08 Rps24-207ENSMUST00000224568 714 ntBASIC16.64■□□□□ 0.25
Fndc4Q3TR08 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fndc4Q3TR08 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fndc4Q3TR08 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.64■□□□□ 0.25
Fndc4Q3TR08 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.64■□□□□ 0.25
Fndc4Q3TR08 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fndc4Q3TR08 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms