Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ush2AQ2QI47 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC10.85□□□□□ -0.67
Ush2AQ2QI47 Gm6934-201ENSMUST00000194780 1905 ntBASIC10.85□□□□□ -0.67
Ush2AQ2QI47 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ush2AQ2QI47 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ush2AQ2QI47 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC10.84□□□□□ -0.67
Ush2AQ2QI47 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ush2AQ2QI47 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ush2AQ2QI47 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ush2AQ2QI47 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ush2AQ2QI47 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ush2AQ2QI47 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ush2AQ2QI47 Gm13534-201ENSMUST00000121169 513 ntBASIC10.84□□□□□ -0.67
Ush2AQ2QI47 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC10.84□□□□□ -0.67
Ush2AQ2QI47 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC10.84□□□□□ -0.67
Ush2AQ2QI47 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ush2AQ2QI47 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Ush2AQ2QI47 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ush2AQ2QI47 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ush2AQ2QI47 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ush2AQ2QI47 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC10.84□□□□□ -0.67
Ush2AQ2QI47 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ush2AQ2QI47 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ush2AQ2QI47 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ush2AQ2QI47 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ush2AQ2QI47 CT010467.1-202ENSMUST00000205406 714 ntBASIC10.83□□□□□ -0.68
Ush2AQ2QI47 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ush2AQ2QI47 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ush2AQ2QI47 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC10.83□□□□□ -0.68
Ush2AQ2QI47 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ush2AQ2QI47 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ush2AQ2QI47 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ush2AQ2QI47 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ush2AQ2QI47 Dio3-201ENSMUST00000097228 1449 ntBASIC10.83□□□□□ -0.68
Ush2AQ2QI47 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC10.83□□□□□ -0.68
Ush2AQ2QI47 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC10.83□□□□□ -0.68
Ush2AQ2QI47 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ush2AQ2QI47 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ush2AQ2QI47 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Ush2AQ2QI47 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ush2AQ2QI47 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC10.82□□□□□ -0.68
Ush2AQ2QI47 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ush2AQ2QI47 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ush2AQ2QI47 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ush2AQ2QI47 Gm38205-201ENSMUST00000192243 258 ntBASIC10.82□□□□□ -0.68
Ush2AQ2QI47 AC159205.3-201ENSMUST00000224614 874 ntBASIC10.82□□□□□ -0.68
Ush2AQ2QI47 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ush2AQ2QI47 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ush2AQ2QI47 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ush2AQ2QI47 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ush2AQ2QI47 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC10.82□□□□□ -0.68
Ush2AQ2QI47 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ush2AQ2QI47 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ush2AQ2QI47 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC10.81□□□□□ -0.68
Ush2AQ2QI47 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ush2AQ2QI47 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ush2AQ2QI47 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC10.81□□□□□ -0.68
Ush2AQ2QI47 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ush2AQ2QI47 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ush2AQ2QI47 Gm6206-201ENSMUST00000133472 2199 ntBASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Gm15378-201ENSMUST00000121894 207 ntBASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 CT030146.1-201ENSMUST00000220919 217 ntBASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Ush2AQ2QI47 Gm44771-201ENSMUST00000206975 626 ntBASIC10.79□□□□□ -0.68
Ush2AQ2QI47 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ush2AQ2QI47 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC10.79□□□□□ -0.68
Ush2AQ2QI47 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC10.79□□□□□ -0.68
Ush2AQ2QI47 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ush2AQ2QI47 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ush2AQ2QI47 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ush2AQ2QI47 Gm6345-202ENSMUST00000180900 204 ntBASIC10.79□□□□□ -0.68
Ush2AQ2QI47 Gm33142-201ENSMUST00000193913 867 ntBASIC10.79□□□□□ -0.68
Ush2AQ2QI47 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ush2AQ2QI47 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ush2AQ2QI47 Nrn1-203ENSMUST00000223611 1443 ntBASIC10.79□□□□□ -0.68
Ush2AQ2QI47 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Ush2AQ2QI47 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ush2AQ2QI47 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Ush2AQ2QI47 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC10.78□□□□□ -0.68
Ush2AQ2QI47 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ush2AQ2QI47 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms