Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox4Q06831 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.42■□□□□ 0.7
Sox4Q06831 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.42■□□□□ 0.7
Sox4Q06831 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sox4Q06831 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.42■□□□□ 0.7
Sox4Q06831 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.42■□□□□ 0.7
Sox4Q06831 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sox4Q06831 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.42■□□□□ 0.7
Sox4Q06831 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox4Q06831 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox4Q06831 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox4Q06831 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.41■□□□□ 0.7
Sox4Q06831 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sox4Q06831 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox4Q06831 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox4Q06831 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox4Q06831 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sox4Q06831 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox4Q06831 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sox4Q06831 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox4Q06831 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox4Q06831 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox4Q06831 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox4Q06831 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Sox4Q06831 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sox4Q06831 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sox4Q06831 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.41■□□□□ 0.7
Sox4Q06831 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sox4Q06831 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Sox4Q06831 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox4Q06831 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sox4Q06831 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox4Q06831 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox4Q06831 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox4Q06831 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sox4Q06831 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sox4Q06831 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sox4Q06831 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox4Q06831 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.4■□□□□ 0.7
Sox4Q06831 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox4Q06831 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox4Q06831 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sox4Q06831 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Sox4Q06831 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.4■□□□□ 0.7
Sox4Q06831 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox4Q06831 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Sox4Q06831 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Sox4Q06831 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sox4Q06831 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sox4Q06831 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox4Q06831 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox4Q06831 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.39■□□□□ 0.69
Sox4Q06831 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox4Q06831 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox4Q06831 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sox4Q06831 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.39■□□□□ 0.69
Sox4Q06831 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox4Q06831 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sox4Q06831 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox4Q06831 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox4Q06831 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sox4Q06831 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sox4Q06831 Smad6-203ENSMUST00000179458 273 ntBASIC19.38■□□□□ 0.69
Sox4Q06831 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox4Q06831 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Sox4Q06831 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox4Q06831 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Sox4Q06831 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sox4Q06831 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox4Q06831 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox4Q06831 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox4Q06831 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox4Q06831 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sox4Q06831 Gm26833-201ENSMUST00000180899 440 ntBASIC19.37■□□□□ 0.69
Sox4Q06831 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.37■□□□□ 0.69
Sox4Q06831 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox4Q06831 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Sox4Q06831 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.37■□□□□ 0.69
Sox4Q06831 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sox4Q06831 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox4Q06831 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox4Q06831 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sox4Q06831 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox4Q06831 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.36■□□□□ 0.69
Sox4Q06831 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox4Q06831 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Sox4Q06831 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.36■□□□□ 0.69
Sox4Q06831 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Sox4Q06831 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sox4Q06831 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sox4Q06831 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sox4Q06831 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox4Q06831 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox4Q06831 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sox4Q06831 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox4Q06831 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Sox4Q06831 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox4Q06831 Gm40848-201ENSMUST00000221998 324 ntBASIC19.35■□□□□ 0.69
Sox4Q06831 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox4Q06831 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms