Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smad4P97471 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Smad4P97471 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.02■□□□□ 0.79
Smad4P97471 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smad4P97471 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smad4P97471 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smad4P97471 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smad4P97471 Gm38205-201ENSMUST00000192243 258 ntBASIC20.01■□□□□ 0.79
Smad4P97471 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.01■□□□□ 0.79
Smad4P97471 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smad4P97471 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smad4P97471 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Smad4P97471 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smad4P97471 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Smad4P97471 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smad4P97471 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smad4P97471 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smad4P97471 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smad4P97471 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smad4P97471 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Smad4P97471 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smad4P97471 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smad4P97471 Gm13534-201ENSMUST00000121169 513 ntBASIC19.99■□□□□ 0.79
Smad4P97471 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smad4P97471 Gm26524-201ENSMUST00000192339 390 ntBASIC19.99■□□□□ 0.79
Smad4P97471 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Smad4P97471 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
Smad4P97471 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smad4P97471 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smad4P97471 Gm6576-201ENSMUST00000169678 883 ntBASIC19.98■□□□□ 0.79
Smad4P97471 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Smad4P97471 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smad4P97471 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Smad4P97471 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smad4P97471 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.98■□□□□ 0.79
Smad4P97471 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smad4P97471 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smad4P97471 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smad4P97471 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smad4P97471 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Smad4P97471 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smad4P97471 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Smad4P97471 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.97■□□□□ 0.79
Smad4P97471 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Smad4P97471 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smad4P97471 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smad4P97471 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smad4P97471 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Smad4P97471 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smad4P97471 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.96■□□□□ 0.79
Smad4P97471 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
Smad4P97471 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smad4P97471 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.95■□□□□ 0.78
Smad4P97471 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smad4P97471 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smad4P97471 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Smad4P97471 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Smad4P97471 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smad4P97471 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smad4P97471 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smad4P97471 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Smad4P97471 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smad4P97471 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smad4P97471 Rab3c-203ENSMUST00000224180 967 ntBASIC19.94■□□□□ 0.78
Smad4P97471 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smad4P97471 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smad4P97471 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smad4P97471 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smad4P97471 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smad4P97471 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Smad4P97471 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smad4P97471 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Smad4P97471 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.93■□□□□ 0.78
Smad4P97471 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Smad4P97471 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.93■□□□□ 0.78
Smad4P97471 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.93■□□□□ 0.78
Smad4P97471 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smad4P97471 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smad4P97471 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smad4P97471 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smad4P97471 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smad4P97471 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.93■□□□□ 0.78
Smad4P97471 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smad4P97471 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.92■□□□□ 0.78
Smad4P97471 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smad4P97471 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Smad4P97471 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Smad4P97471 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smad4P97471 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smad4P97471 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smad4P97471 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smad4P97471 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smad4P97471 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Smad4P97471 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smad4P97471 Gm27275-201ENSMUST00000184318 272 ntBASIC19.91■□□□□ 0.78
Smad4P97471 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.91■□□□□ 0.78
Smad4P97471 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smad4P97471 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smad4P97471 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smad4P97471 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms