Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim43cP86449 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
Trim43cP86449 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim43cP86449 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.54■■□□□ 1.04
Trim43cP86449 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim43cP86449 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim43cP86449 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim43cP86449 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim43cP86449 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
Trim43cP86449 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim43cP86449 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trim43cP86449 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim43cP86449 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim43cP86449 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Trim43cP86449 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim43cP86449 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.53■■□□□ 1.04
Trim43cP86449 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Trim43cP86449 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim43cP86449 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim43cP86449 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trim43cP86449 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim43cP86449 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Trim43cP86449 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.52■■□□□ 1.04
Trim43cP86449 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.52■■□□□ 1.04
Trim43cP86449 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim43cP86449 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim43cP86449 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim43cP86449 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Trim43cP86449 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
Trim43cP86449 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim43cP86449 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Trim43cP86449 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
Trim43cP86449 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Trim43cP86449 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim43cP86449 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim43cP86449 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim43cP86449 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
Trim43cP86449 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.51■■□□□ 1.03
Trim43cP86449 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Trim43cP86449 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Trim43cP86449 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim43cP86449 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43cP86449 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43cP86449 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Trim43cP86449 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43cP86449 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43cP86449 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43cP86449 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43cP86449 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43cP86449 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43cP86449 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43cP86449 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43cP86449 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43cP86449 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Trim43cP86449 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43cP86449 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43cP86449 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43cP86449 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim43cP86449 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Trim43cP86449 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim43cP86449 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.49■■□□□ 1.03
Trim43cP86449 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim43cP86449 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.49■■□□□ 1.03
Trim43cP86449 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.49■■□□□ 1.03
Trim43cP86449 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim43cP86449 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim43cP86449 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim43cP86449 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim43cP86449 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim43cP86449 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim43cP86449 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim43cP86449 Spcs1-204ENSMUST00000226782 949 ntBASIC21.48■■□□□ 1.03
Trim43cP86449 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim43cP86449 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.48■■□□□ 1.03
Trim43cP86449 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Trim43cP86449 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim43cP86449 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.48■■□□□ 1.03
Trim43cP86449 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim43cP86449 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim43cP86449 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.48■■□□□ 1.03
Trim43cP86449 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Trim43cP86449 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim43cP86449 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.47■■□□□ 1.03
Trim43cP86449 Gm27454-201ENSMUST00000185090 204 ntBASIC21.47■■□□□ 1.03
Trim43cP86449 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.47■■□□□ 1.03
Trim43cP86449 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Trim43cP86449 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Trim43cP86449 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim43cP86449 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.46■■□□□ 1.03
Trim43cP86449 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim43cP86449 Golph3-202ENSMUST00000226517 2359 ntBASIC21.46■■□□□ 1.03
Trim43cP86449 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim43cP86449 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim43cP86449 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.46■■□□□ 1.03
Trim43cP86449 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim43cP86449 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.46■■□□□ 1.03
Trim43cP86449 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Trim43cP86449 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim43cP86449 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
Trim43cP86449 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms