Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SgcbP82349 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SgcbP82349 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SgcbP82349 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SgcbP82349 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SgcbP82349 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SgcbP82349 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SgcbP82349 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SgcbP82349 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.58■□□□□ 0.41
SgcbP82349 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
SgcbP82349 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SgcbP82349 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SgcbP82349 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SgcbP82349 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SgcbP82349 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SgcbP82349 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.57■□□□□ 0.4
SgcbP82349 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SgcbP82349 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SgcbP82349 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SgcbP82349 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.57■□□□□ 0.4
SgcbP82349 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SgcbP82349 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SgcbP82349 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SgcbP82349 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
SgcbP82349 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SgcbP82349 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SgcbP82349 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.56■□□□□ 0.4
SgcbP82349 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SgcbP82349 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SgcbP82349 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SgcbP82349 Gm43017-201ENSMUST00000198296 752 ntBASIC17.56■□□□□ 0.4
SgcbP82349 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SgcbP82349 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SgcbP82349 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcbP82349 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SgcbP82349 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SgcbP82349 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcbP82349 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.55■□□□□ 0.4
SgcbP82349 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SgcbP82349 Gm12251-201ENSMUST00000117893 792 ntBASIC17.55■□□□□ 0.4
SgcbP82349 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SgcbP82349 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SgcbP82349 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SgcbP82349 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcbP82349 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcbP82349 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.55■□□□□ 0.4
SgcbP82349 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcbP82349 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcbP82349 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SgcbP82349 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SgcbP82349 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SgcbP82349 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.54■□□□□ 0.4
SgcbP82349 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SgcbP82349 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.54■□□□□ 0.4
SgcbP82349 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SgcbP82349 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SgcbP82349 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SgcbP82349 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.54■□□□□ 0.4
SgcbP82349 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SgcbP82349 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SgcbP82349 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.53■□□□□ 0.4
SgcbP82349 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.53■□□□□ 0.4
SgcbP82349 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.53■□□□□ 0.4
SgcbP82349 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SgcbP82349 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SgcbP82349 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SgcbP82349 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.53■□□□□ 0.4
SgcbP82349 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SgcbP82349 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SgcbP82349 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SgcbP82349 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SgcbP82349 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcbP82349 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcbP82349 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.52■□□□□ 0.4
SgcbP82349 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcbP82349 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcbP82349 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcbP82349 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SgcbP82349 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcbP82349 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcbP82349 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SgcbP82349 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.52■□□□□ 0.4
SgcbP82349 Serp2-204ENSMUST00000228055 705 ntBASIC17.52■□□□□ 0.4
SgcbP82349 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SgcbP82349 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcbP82349 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcbP82349 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SgcbP82349 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SgcbP82349 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SgcbP82349 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.52■□□□□ 0.39
SgcbP82349 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
SgcbP82349 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SgcbP82349 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SgcbP82349 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.51■□□□□ 0.39
SgcbP82349 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SgcbP82349 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.51■□□□□ 0.39
SgcbP82349 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SgcbP82349 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SgcbP82349 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.51■□□□□ 0.39
SgcbP82349 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms