Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ldb1P70662 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ldb1P70662 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ldb1P70662 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ldb1P70662 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.67■□□□□ 0.74
Ldb1P70662 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ldb1P70662 Gm9847-201ENSMUST00000052528 599 ntBASIC19.67■□□□□ 0.74
Ldb1P70662 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ldb1P70662 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ldb1P70662 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ldb1P70662 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ldb1P70662 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ldb1P70662 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.67■□□□□ 0.74
Ldb1P70662 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ldb1P70662 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ldb1P70662 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ldb1P70662 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ldb1P70662 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ldb1P70662 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ldb1P70662 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Ldb1P70662 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ldb1P70662 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ldb1P70662 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ldb1P70662 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.65■□□□□ 0.74
Ldb1P70662 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ldb1P70662 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ldb1P70662 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ldb1P70662 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ldb1P70662 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
Ldb1P70662 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ldb1P70662 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ldb1P70662 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ldb1P70662 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ldb1P70662 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ldb1P70662 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ldb1P70662 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.64■□□□□ 0.73
Ldb1P70662 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ldb1P70662 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.64■□□□□ 0.73
Ldb1P70662 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.64■□□□□ 0.73
Ldb1P70662 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ldb1P70662 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ldb1P70662 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ldb1P70662 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ldb1P70662 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ldb1P70662 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ldb1P70662 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ldb1P70662 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.63■□□□□ 0.73
Ldb1P70662 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ldb1P70662 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ldb1P70662 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ldb1P70662 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ldb1P70662 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ldb1P70662 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.63■□□□□ 0.73
Ldb1P70662 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ldb1P70662 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ldb1P70662 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ldb1P70662 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ldb1P70662 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ldb1P70662 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ldb1P70662 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ldb1P70662 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ldb1P70662 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.61■□□□□ 0.73
Ldb1P70662 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ldb1P70662 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.61■□□□□ 0.73
Ldb1P70662 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.61■□□□□ 0.73
Ldb1P70662 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.61■□□□□ 0.73
Ldb1P70662 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ldb1P70662 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ldb1P70662 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ldb1P70662 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ldb1P70662 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ldb1P70662 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ldb1P70662 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ldb1P70662 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.6■□□□□ 0.73
Ldb1P70662 Gm21956-201ENSMUST00000179946 522 ntBASIC19.6■□□□□ 0.73
Ldb1P70662 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Ldb1P70662 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
Ldb1P70662 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ldb1P70662 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.59■□□□□ 0.73
Ldb1P70662 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ldb1P70662 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Ldb1P70662 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ldb1P70662 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ldb1P70662 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.59■□□□□ 0.73
Ldb1P70662 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ldb1P70662 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.59■□□□□ 0.73
Ldb1P70662 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ldb1P70662 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ldb1P70662 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ldb1P70662 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ldb1P70662 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ldb1P70662 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Ldb1P70662 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.58■□□□□ 0.73
Ldb1P70662 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.58■□□□□ 0.73
Ldb1P70662 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Ldb1P70662 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Ldb1P70662 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.58■□□□□ 0.72
Ldb1P70662 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Ldb1P70662 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ldb1P70662 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms