Protein–RNA interactions for Protein: P70441

Slc9a3r1, Na(+)/H(+) exchange regulatory cofactor NHE-RF1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a3r1P70441 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc9a3r1P70441 Gm10493-201ENSMUST00000097270 612 ntBASIC18.87■□□□□ 0.61
Slc9a3r1P70441 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc9a3r1P70441 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Slc9a3r1P70441 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc9a3r1P70441 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc9a3r1P70441 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc9a3r1P70441 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Slc9a3r1P70441 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.86■□□□□ 0.61
Slc9a3r1P70441 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc9a3r1P70441 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
Slc9a3r1P70441 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc9a3r1P70441 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc9a3r1P70441 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc9a3r1P70441 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc9a3r1P70441 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc9a3r1P70441 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.85■□□□□ 0.61
Slc9a3r1P70441 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc9a3r1P70441 Gm11421-201ENSMUST00000122124 294 ntBASIC18.85■□□□□ 0.61
Slc9a3r1P70441 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.85■□□□□ 0.61
Slc9a3r1P70441 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
Slc9a3r1P70441 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc9a3r1P70441 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.85■□□□□ 0.61
Slc9a3r1P70441 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc9a3r1P70441 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc9a3r1P70441 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Slc9a3r1P70441 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc9a3r1P70441 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc9a3r1P70441 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc9a3r1P70441 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a3r1P70441 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.84■□□□□ 0.61
Slc9a3r1P70441 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a3r1P70441 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a3r1P70441 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a3r1P70441 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a3r1P70441 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a3r1P70441 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a3r1P70441 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a3r1P70441 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc9a3r1P70441 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc9a3r1P70441 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc9a3r1P70441 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Slc9a3r1P70441 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Slc9a3r1P70441 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc9a3r1P70441 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Slc9a3r1P70441 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc9a3r1P70441 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.83■□□□□ 0.6
Slc9a3r1P70441 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Slc9a3r1P70441 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.83■□□□□ 0.6
Slc9a3r1P70441 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc9a3r1P70441 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc9a3r1P70441 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc9a3r1P70441 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Slc9a3r1P70441 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc9a3r1P70441 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc9a3r1P70441 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc9a3r1P70441 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc9a3r1P70441 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc9a3r1P70441 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc9a3r1P70441 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.82■□□□□ 0.6
Slc9a3r1P70441 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc9a3r1P70441 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
Slc9a3r1P70441 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc9a3r1P70441 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slc9a3r1P70441 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.81■□□□□ 0.6
Slc9a3r1P70441 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.81■□□□□ 0.6
Slc9a3r1P70441 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.81■□□□□ 0.6
Slc9a3r1P70441 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.81■□□□□ 0.6
Slc9a3r1P70441 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.81■□□□□ 0.6
Slc9a3r1P70441 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc9a3r1P70441 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc9a3r1P70441 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc9a3r1P70441 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc9a3r1P70441 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc9a3r1P70441 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc9a3r1P70441 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc9a3r1P70441 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.8■□□□□ 0.6
Slc9a3r1P70441 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Slc9a3r1P70441 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc9a3r1P70441 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc9a3r1P70441 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc9a3r1P70441 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc9a3r1P70441 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Slc9a3r1P70441 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc9a3r1P70441 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc9a3r1P70441 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a3r1P70441 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a3r1P70441 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.79■□□□□ 0.6
Slc9a3r1P70441 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a3r1P70441 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a3r1P70441 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a3r1P70441 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a3r1P70441 Gm42642-201ENSMUST00000200683 355 ntBASIC18.79■□□□□ 0.6
Slc9a3r1P70441 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a3r1P70441 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a3r1P70441 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a3r1P70441 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.79■□□□□ 0.6
Slc9a3r1P70441 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slc9a3r1P70441 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc9a3r1P70441 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms