Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Hmgb1P63158 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.67■■□□□ 1.06
Hmgb1P63158 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hmgb1P63158 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hmgb1P63158 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
Hmgb1P63158 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.66■■□□□ 1.06
Hmgb1P63158 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Hmgb1P63158 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Hmgb1P63158 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.66■■□□□ 1.06
Hmgb1P63158 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Hmgb1P63158 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgb1P63158 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Hmgb1P63158 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgb1P63158 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgb1P63158 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgb1P63158 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgb1P63158 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgb1P63158 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgb1P63158 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgb1P63158 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgb1P63158 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Hmgb1P63158 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Hmgb1P63158 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Hmgb1P63158 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.64■■□□□ 1.05
Hmgb1P63158 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.64■■□□□ 1.05
Hmgb1P63158 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.64■■□□□ 1.05
Hmgb1P63158 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hmgb1P63158 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hmgb1P63158 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Hmgb1P63158 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hmgb1P63158 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Hmgb1P63158 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hmgb1P63158 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hmgb1P63158 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hmgb1P63158 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hmgb1P63158 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hmgb1P63158 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hmgb1P63158 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hmgb1P63158 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hmgb1P63158 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Hmgb1P63158 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hmgb1P63158 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.62■■□□□ 1.05
Hmgb1P63158 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Hmgb1P63158 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Hmgb1P63158 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.62■■□□□ 1.05
Hmgb1P63158 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.61■■□□□ 1.05
Hmgb1P63158 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hmgb1P63158 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hmgb1P63158 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hmgb1P63158 Gm45102-201ENSMUST00000207427 857 ntBASIC21.61■■□□□ 1.05
Hmgb1P63158 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hmgb1P63158 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Hmgb1P63158 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hmgb1P63158 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.61■■□□□ 1.05
Hmgb1P63158 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.6■■□□□ 1.05
Hmgb1P63158 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.6■■□□□ 1.05
Hmgb1P63158 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Hmgb1P63158 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hmgb1P63158 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Hmgb1P63158 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hmgb1P63158 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hmgb1P63158 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
Hmgb1P63158 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Hmgb1P63158 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Hmgb1P63158 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hmgb1P63158 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hmgb1P63158 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Hmgb1P63158 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgb1P63158 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Hmgb1P63158 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.59■■□□□ 1.05
Hmgb1P63158 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgb1P63158 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgb1P63158 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgb1P63158 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.59■■□□□ 1.05
Hmgb1P63158 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgb1P63158 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgb1P63158 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgb1P63158 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Hmgb1P63158 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hmgb1P63158 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hmgb1P63158 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hmgb1P63158 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hmgb1P63158 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hmgb1P63158 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hmgb1P63158 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hmgb1P63158 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Hmgb1P63158 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.57■■□□□ 1.04
Hmgb1P63158 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hmgb1P63158 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hmgb1P63158 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hmgb1P63158 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.57■■□□□ 1.04
Hmgb1P63158 Rps24-207ENSMUST00000224568 714 ntBASIC21.57■■□□□ 1.04
Hmgb1P63158 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Hmgb1P63158 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
Hmgb1P63158 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hmgb1P63158 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.56■■□□□ 1.04
Hmgb1P63158 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.56■■□□□ 1.04
Hmgb1P63158 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hmgb1P63158 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hmgb1P63158 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms