Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx6P54823 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx6P54823 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx6P54823 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.16■□□□□ 0.82
Ddx6P54823 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ddx6P54823 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx6P54823 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx6P54823 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx6P54823 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx6P54823 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ddx6P54823 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.15■□□□□ 0.82
Ddx6P54823 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.15■□□□□ 0.82
Ddx6P54823 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx6P54823 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx6P54823 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Ddx6P54823 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
Ddx6P54823 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx6P54823 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx6P54823 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx6P54823 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx6P54823 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx6P54823 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx6P54823 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.14■□□□□ 0.81
Ddx6P54823 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx6P54823 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.14■□□□□ 0.81
Ddx6P54823 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx6P54823 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.14■□□□□ 0.81
Ddx6P54823 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx6P54823 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx6P54823 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx6P54823 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx6P54823 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx6P54823 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx6P54823 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.13■□□□□ 0.81
Ddx6P54823 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ddx6P54823 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx6P54823 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.13■□□□□ 0.81
Ddx6P54823 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.13■□□□□ 0.81
Ddx6P54823 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.13■□□□□ 0.81
Ddx6P54823 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx6P54823 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx6P54823 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx6P54823 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.13■□□□□ 0.81
Ddx6P54823 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx6P54823 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx6P54823 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Ddx6P54823 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx6P54823 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Ddx6P54823 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.12■□□□□ 0.81
Ddx6P54823 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx6P54823 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.12■□□□□ 0.81
Ddx6P54823 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx6P54823 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Ddx6P54823 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx6P54823 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx6P54823 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ddx6P54823 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.11■□□□□ 0.81
Ddx6P54823 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ddx6P54823 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Ddx6P54823 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Ddx6P54823 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx6P54823 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.11■□□□□ 0.81
Ddx6P54823 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ddx6P54823 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Ddx6P54823 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx6P54823 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ddx6P54823 Gm12933-201ENSMUST00000120203 872 ntBASIC20.1■□□□□ 0.81
Ddx6P54823 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.1■□□□□ 0.81
Ddx6P54823 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx6P54823 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ddx6P54823 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx6P54823 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.1■□□□□ 0.81
Ddx6P54823 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx6P54823 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Ddx6P54823 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ddx6P54823 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx6P54823 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx6P54823 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx6P54823 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx6P54823 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx6P54823 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.08■□□□□ 0.81
Ddx6P54823 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx6P54823 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx6P54823 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.08■□□□□ 0.81
Ddx6P54823 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx6P54823 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx6P54823 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx6P54823 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx6P54823 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ddx6P54823 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ddx6P54823 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ddx6P54823 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx6P54823 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ddx6P54823 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Ddx6P54823 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx6P54823 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.07■□□□□ 0.8
Ddx6P54823 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.07■□□□□ 0.8
Ddx6P54823 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx6P54823 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx6P54823 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms