Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
Msh6P54276 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Msh6P54276 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Msh6P54276 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Msh6P54276 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC25.33■■□□□ 1.65
Msh6P54276 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC25.33■■□□□ 1.65
Msh6P54276 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC25.33■■□□□ 1.64
Msh6P54276 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC25.32■■□□□ 1.64
Msh6P54276 Gm13234-201ENSMUST00000120010 747 ntBASIC25.32■■□□□ 1.64
Msh6P54276 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Msh6P54276 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC25.32■■□□□ 1.64
Msh6P54276 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC25.32■■□□□ 1.64
Msh6P54276 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Msh6P54276 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Msh6P54276 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Msh6P54276 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
Msh6P54276 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Msh6P54276 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Msh6P54276 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Msh6P54276 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Msh6P54276 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Msh6P54276 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Msh6P54276 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
Msh6P54276 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Msh6P54276 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Msh6P54276 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Msh6P54276 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Msh6P54276 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Msh6P54276 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Msh6P54276 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Msh6P54276 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC25.3■■□□□ 1.64
Msh6P54276 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Msh6P54276 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Msh6P54276 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC25.3■■□□□ 1.64
Msh6P54276 Gm9988-201ENSMUST00000069786 435 ntBASIC25.3■■□□□ 1.64
Msh6P54276 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Msh6P54276 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Msh6P54276 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Msh6P54276 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Msh6P54276 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC25.29■■□□□ 1.64
Msh6P54276 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Msh6P54276 Gm37035-201ENSMUST00000194809 2148 ntBASIC25.29■■□□□ 1.64
Msh6P54276 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Msh6P54276 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
Msh6P54276 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Msh6P54276 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Msh6P54276 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Msh6P54276 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Msh6P54276 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Msh6P54276 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC25.28■■□□□ 1.64
Msh6P54276 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Msh6P54276 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Msh6P54276 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Msh6P54276 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC25.28■■□□□ 1.64
Msh6P54276 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Msh6P54276 AC152827.1-201ENSMUST00000221143 2189 ntBASIC25.27■■□□□ 1.64
Msh6P54276 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Msh6P54276 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Msh6P54276 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Msh6P54276 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Msh6P54276 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
Msh6P54276 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Msh6P54276 Reep4-203ENSMUST00000226563 1444 ntBASIC25.26■■□□□ 1.63
Msh6P54276 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Msh6P54276 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Msh6P54276 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Msh6P54276 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC25.26■■□□□ 1.63
Msh6P54276 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC25.26■■□□□ 1.63
Msh6P54276 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Msh6P54276 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Msh6P54276 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Msh6P54276 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC25.26■■□□□ 1.63
Msh6P54276 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Msh6P54276 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Msh6P54276 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Msh6P54276 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Msh6P54276 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Msh6P54276 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Msh6P54276 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Msh6P54276 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Msh6P54276 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC25.24■■□□□ 1.63
Msh6P54276 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Msh6P54276 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
Msh6P54276 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Msh6P54276 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Msh6P54276 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC25.23■■□□□ 1.63
Msh6P54276 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Msh6P54276 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Msh6P54276 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Msh6P54276 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Msh6P54276 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Msh6P54276 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Msh6P54276 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
Msh6P54276 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Msh6P54276 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
Msh6P54276 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Msh6P54276 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
Msh6P54276 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Msh6P54276 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Msh6P54276 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms