Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox1P53783 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox1P53783 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sox1P53783 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox1P53783 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox1P53783 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Sox1P53783 Gm5643-201ENSMUST00000117081 966 ntBASIC20.35■□□□□ 0.85
Sox1P53783 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.35■□□□□ 0.85
Sox1P53783 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Sox1P53783 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.35■□□□□ 0.85
Sox1P53783 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Sox1P53783 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sox1P53783 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Sox1P53783 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Sox1P53783 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox1P53783 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox1P53783 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.34■□□□□ 0.85
Sox1P53783 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.34■□□□□ 0.85
Sox1P53783 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sox1P53783 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox1P53783 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Sox1P53783 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.34■□□□□ 0.85
Sox1P53783 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sox1P53783 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sox1P53783 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sox1P53783 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.33■□□□□ 0.85
Sox1P53783 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.33■□□□□ 0.85
Sox1P53783 Gm26524-201ENSMUST00000192339 390 ntBASIC20.33■□□□□ 0.85
Sox1P53783 Gm21362-201ENSMUST00000194272 928 ntBASIC20.33■□□□□ 0.85
Sox1P53783 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sox1P53783 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Sox1P53783 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sox1P53783 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sox1P53783 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Sox1P53783 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox1P53783 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox1P53783 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sox1P53783 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Sox1P53783 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox1P53783 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Sox1P53783 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.32■□□□□ 0.84
Sox1P53783 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.32■□□□□ 0.84
Sox1P53783 Gm37055-201ENSMUST00000191866 133 ntBASIC20.32■□□□□ 0.84
Sox1P53783 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox1P53783 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox1P53783 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox1P53783 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox1P53783 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox1P53783 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox1P53783 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Sox1P53783 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.31■□□□□ 0.84
Sox1P53783 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.31■□□□□ 0.84
Sox1P53783 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox1P53783 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox1P53783 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Sox1P53783 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.3■□□□□ 0.84
Sox1P53783 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Sox1P53783 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.29■□□□□ 0.84
Sox1P53783 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sox1P53783 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sox1P53783 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sox1P53783 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.29■□□□□ 0.84
Sox1P53783 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.29■□□□□ 0.84
Sox1P53783 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.29■□□□□ 0.84
Sox1P53783 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sox1P53783 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox1P53783 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox1P53783 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox1P53783 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sox1P53783 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox1P53783 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.28■□□□□ 0.84
Sox1P53783 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sox1P53783 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox1P53783 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sox1P53783 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.28■□□□□ 0.84
Sox1P53783 Gm27741-201ENSMUST00000185060 237 ntBASIC20.28■□□□□ 0.84
Sox1P53783 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.28■□□□□ 0.84
Sox1P53783 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox1P53783 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox1P53783 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox1P53783 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox1P53783 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox1P53783 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sox1P53783 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sox1P53783 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sox1P53783 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sox1P53783 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.27■□□□□ 0.84
Sox1P53783 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sox1P53783 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.27■□□□□ 0.84
Sox1P53783 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.27■□□□□ 0.84
Sox1P53783 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.83
Sox1P53783 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Sox1P53783 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sox1P53783 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.26■□□□□ 0.83
Sox1P53783 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sox1P53783 Gm12896-201ENSMUST00000118430 226 ntBASIC20.26■□□□□ 0.83
Sox1P53783 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Sox1P53783 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Sox1P53783 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.26■□□□□ 0.83
Sox1P53783 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms