Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Srp9P49962 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Srp9P49962 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srp9P49962 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srp9P49962 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Srp9P49962 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.7■□□□□ 0.26
Srp9P49962 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.7■□□□□ 0.26
Srp9P49962 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.7■□□□□ 0.26
Srp9P49962 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srp9P49962 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Srp9P49962 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.7■□□□□ 0.26
Srp9P49962 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srp9P49962 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srp9P49962 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srp9P49962 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srp9P49962 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Srp9P49962 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Srp9P49962 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srp9P49962 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srp9P49962 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srp9P49962 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srp9P49962 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srp9P49962 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srp9P49962 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Srp9P49962 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Srp9P49962 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srp9P49962 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srp9P49962 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Srp9P49962 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srp9P49962 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Srp9P49962 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srp9P49962 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srp9P49962 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srp9P49962 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srp9P49962 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srp9P49962 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Srp9P49962 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp9P49962 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp9P49962 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp9P49962 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp9P49962 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp9P49962 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp9P49962 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.67■□□□□ 0.26
Srp9P49962 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.67■□□□□ 0.26
Srp9P49962 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp9P49962 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp9P49962 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.67■□□□□ 0.26
Srp9P49962 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Srp9P49962 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.67■□□□□ 0.26
Srp9P49962 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp9P49962 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Srp9P49962 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.67■□□□□ 0.26
Srp9P49962 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.67■□□□□ 0.26
Srp9P49962 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp9P49962 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.66■□□□□ 0.26
Srp9P49962 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp9P49962 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp9P49962 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp9P49962 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Srp9P49962 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Srp9P49962 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Srp9P49962 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Srp9P49962 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp9P49962 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp9P49962 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp9P49962 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.66■□□□□ 0.26
Srp9P49962 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp9P49962 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Srp9P49962 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srp9P49962 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srp9P49962 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srp9P49962 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Srp9P49962 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Srp9P49962 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Srp9P49962 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srp9P49962 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.65■□□□□ 0.26
Srp9P49962 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srp9P49962 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srp9P49962 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srp9P49962 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.65■□□□□ 0.26
Srp9P49962 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srp9P49962 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srp9P49962 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srp9P49962 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.64■□□□□ 0.25
Srp9P49962 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srp9P49962 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Srp9P49962 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srp9P49962 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.64■□□□□ 0.25
Srp9P49962 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Srp9P49962 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Srp9P49962 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Srp9P49962 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Srp9P49962 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.64■□□□□ 0.25
Srp9P49962 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp9P49962 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Srp9P49962 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.63■□□□□ 0.25
Srp9P49962 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp9P49962 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp9P49962 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp9P49962 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 111.1 ms