Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LmnaP48678 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LmnaP48678 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LmnaP48678 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.3■□□□□ 0.84
LmnaP48678 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.3■□□□□ 0.84
LmnaP48678 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.3■□□□□ 0.84
LmnaP48678 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LmnaP48678 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LmnaP48678 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LmnaP48678 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LmnaP48678 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LmnaP48678 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LmnaP48678 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LmnaP48678 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LmnaP48678 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LmnaP48678 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LmnaP48678 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LmnaP48678 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LmnaP48678 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LmnaP48678 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LmnaP48678 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LmnaP48678 AV356131-201ENSMUST00000206201 750 ntBASIC20.29■□□□□ 0.84
LmnaP48678 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LmnaP48678 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LmnaP48678 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LmnaP48678 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LmnaP48678 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LmnaP48678 Iqck-206ENSMUST00000208658 2891 ntBASIC20.28■□□□□ 0.84
LmnaP48678 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LmnaP48678 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.28■□□□□ 0.84
LmnaP48678 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LmnaP48678 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LmnaP48678 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LmnaP48678 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LmnaP48678 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LmnaP48678 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LmnaP48678 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.28■□□□□ 0.84
LmnaP48678 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LmnaP48678 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LmnaP48678 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LmnaP48678 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LmnaP48678 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LmnaP48678 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.27■□□□□ 0.84
LmnaP48678 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
LmnaP48678 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LmnaP48678 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LmnaP48678 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LmnaP48678 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LmnaP48678 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LmnaP48678 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LmnaP48678 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.26■□□□□ 0.83
LmnaP48678 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LmnaP48678 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LmnaP48678 Gm40848-201ENSMUST00000221998 324 ntBASIC20.26■□□□□ 0.83
LmnaP48678 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LmnaP48678 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LmnaP48678 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LmnaP48678 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
LmnaP48678 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
LmnaP48678 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.25■□□□□ 0.83
LmnaP48678 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LmnaP48678 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LmnaP48678 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
LmnaP48678 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LmnaP48678 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LmnaP48678 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LmnaP48678 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LmnaP48678 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LmnaP48678 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LmnaP48678 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.24■□□□□ 0.83
LmnaP48678 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LmnaP48678 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LmnaP48678 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.24■□□□□ 0.83
LmnaP48678 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.24■□□□□ 0.83
LmnaP48678 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
LmnaP48678 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LmnaP48678 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LmnaP48678 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.24■□□□□ 0.83
LmnaP48678 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LmnaP48678 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LmnaP48678 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LmnaP48678 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LmnaP48678 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LmnaP48678 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LmnaP48678 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.23■□□□□ 0.83
LmnaP48678 Gm10033-202ENSMUST00000211874 928 ntBASIC20.23■□□□□ 0.83
LmnaP48678 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LmnaP48678 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LmnaP48678 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LmnaP48678 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
LmnaP48678 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LmnaP48678 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.23■□□□□ 0.83
LmnaP48678 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LmnaP48678 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
LmnaP48678 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LmnaP48678 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LmnaP48678 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LmnaP48678 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LmnaP48678 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LmnaP48678 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms