Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Prox1P48437 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Prox1P48437 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prox1P48437 Golph3-205ENSMUST00000228671 2842 ntBASIC18.84■□□□□ 0.61
Prox1P48437 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prox1P48437 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prox1P48437 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prox1P48437 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prox1P48437 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Prox1P48437 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prox1P48437 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.83■□□□□ 0.6
Prox1P48437 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prox1P48437 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.83■□□□□ 0.6
Prox1P48437 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Prox1P48437 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
Prox1P48437 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prox1P48437 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prox1P48437 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Prox1P48437 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.82■□□□□ 0.6
Prox1P48437 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prox1P48437 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prox1P48437 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prox1P48437 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prox1P48437 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prox1P48437 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prox1P48437 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Prox1P48437 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prox1P48437 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Prox1P48437 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prox1P48437 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prox1P48437 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.81■□□□□ 0.6
Prox1P48437 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prox1P48437 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Prox1P48437 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Prox1P48437 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prox1P48437 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.81■□□□□ 0.6
Prox1P48437 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.81■□□□□ 0.6
Prox1P48437 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.81■□□□□ 0.6
Prox1P48437 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prox1P48437 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Prox1P48437 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prox1P48437 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Prox1P48437 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Prox1P48437 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prox1P48437 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.8■□□□□ 0.6
Prox1P48437 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prox1P48437 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prox1P48437 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prox1P48437 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prox1P48437 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Prox1P48437 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prox1P48437 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prox1P48437 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Prox1P48437 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prox1P48437 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prox1P48437 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prox1P48437 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prox1P48437 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.78■□□□□ 0.6
Prox1P48437 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prox1P48437 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.78■□□□□ 0.6
Prox1P48437 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.78■□□□□ 0.6
Prox1P48437 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prox1P48437 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prox1P48437 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prox1P48437 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prox1P48437 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prox1P48437 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prox1P48437 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prox1P48437 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Prox1P48437 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.77■□□□□ 0.6
Prox1P48437 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Prox1P48437 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prox1P48437 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prox1P48437 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.77■□□□□ 0.6
Prox1P48437 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prox1P48437 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Prox1P48437 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prox1P48437 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prox1P48437 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Prox1P48437 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.76■□□□□ 0.59
Prox1P48437 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prox1P48437 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prox1P48437 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prox1P48437 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prox1P48437 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prox1P48437 Gm10399-202ENSMUST00000202768 748 ntBASIC18.76■□□□□ 0.59
Prox1P48437 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.76■□□□□ 0.59
Prox1P48437 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prox1P48437 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prox1P48437 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.76■□□□□ 0.59
Prox1P48437 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prox1P48437 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prox1P48437 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prox1P48437 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.75■□□□□ 0.59
Prox1P48437 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Prox1P48437 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prox1P48437 Gm43566-201ENSMUST00000196851 808 ntBASIC18.75■□□□□ 0.59
Prox1P48437 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prox1P48437 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prox1P48437 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms