Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
Rfx2P48379 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx2P48379 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx2P48379 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx2P48379 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx2P48379 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx2P48379 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Rfx2P48379 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.67■□□□□ 0.9
Rfx2P48379 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx2P48379 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx2P48379 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.66■□□□□ 0.9
Rfx2P48379 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.66■□□□□ 0.9
Rfx2P48379 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx2P48379 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx2P48379 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rfx2P48379 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx2P48379 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx2P48379 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx2P48379 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx2P48379 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.65■□□□□ 0.9
Rfx2P48379 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.65■□□□□ 0.9
Rfx2P48379 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx2P48379 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx2P48379 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rfx2P48379 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx2P48379 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx2P48379 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx2P48379 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.65■□□□□ 0.9
Rfx2P48379 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx2P48379 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rfx2P48379 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfx2P48379 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfx2P48379 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx2P48379 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx2P48379 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx2P48379 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.64■□□□□ 0.89
Rfx2P48379 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx2P48379 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx2P48379 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Rfx2P48379 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.63■□□□□ 0.89
Rfx2P48379 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx2P48379 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx2P48379 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx2P48379 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx2P48379 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx2P48379 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx2P48379 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx2P48379 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rfx2P48379 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx2P48379 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Rfx2P48379 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx2P48379 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.62■□□□□ 0.89
Rfx2P48379 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.62■□□□□ 0.89
Rfx2P48379 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.62■□□□□ 0.89
Rfx2P48379 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx2P48379 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx2P48379 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx2P48379 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx2P48379 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rfx2P48379 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rfx2P48379 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx2P48379 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Rfx2P48379 Gm43060-201ENSMUST00000200621 289 ntBASIC20.61■□□□□ 0.89
Rfx2P48379 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.61■□□□□ 0.89
Rfx2P48379 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx2P48379 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rfx2P48379 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rfx2P48379 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx2P48379 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx2P48379 Gm5874-201ENSMUST00000096101 508 ntBASIC20.6■□□□□ 0.89
Rfx2P48379 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx2P48379 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx2P48379 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx2P48379 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx2P48379 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx2P48379 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rfx2P48379 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx2P48379 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rfx2P48379 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.59■□□□□ 0.89
Rfx2P48379 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx2P48379 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx2P48379 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx2P48379 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.59■□□□□ 0.89
Rfx2P48379 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rfx2P48379 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx2P48379 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx2P48379 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Rfx2P48379 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx2P48379 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx2P48379 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx2P48379 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx2P48379 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx2P48379 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.58■□□□□ 0.89
Rfx2P48379 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx2P48379 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Rfx2P48379 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx2P48379 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.58■□□□□ 0.89
Rfx2P48379 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx2P48379 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx2P48379 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms