Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nkx2-6P43688 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Nkx2-6P43688 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Nkx2-6P43688 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-6P43688 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-6P43688 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Nkx2-6P43688 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-6P43688 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nkx2-6P43688 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-6P43688 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-6P43688 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-6P43688 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-6P43688 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Nkx2-6P43688 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.66■□□□□ 0.58
Nkx2-6P43688 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-6P43688 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nkx2-6P43688 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Nkx2-6P43688 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nkx2-6P43688 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-6P43688 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-6P43688 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Nkx2-6P43688 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-6P43688 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-6P43688 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Nkx2-6P43688 Gm18671-201ENSMUST00000214826 683 ntBASIC18.65■□□□□ 0.58
Nkx2-6P43688 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-6P43688 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nkx2-6P43688 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nkx2-6P43688 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-6P43688 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.65■□□□□ 0.58
Nkx2-6P43688 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-6P43688 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nkx2-6P43688 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nkx2-6P43688 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-6P43688 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-6P43688 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-6P43688 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Nkx2-6P43688 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Nkx2-6P43688 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.64■□□□□ 0.57
Nkx2-6P43688 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.64■□□□□ 0.57
Nkx2-6P43688 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-6P43688 Gm37179-201ENSMUST00000194862 823 ntBASIC18.64■□□□□ 0.57
Nkx2-6P43688 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.64■□□□□ 0.57
Nkx2-6P43688 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-6P43688 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-6P43688 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-6P43688 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-6P43688 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.64■□□□□ 0.57
Nkx2-6P43688 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Nkx2-6P43688 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nkx2-6P43688 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-6P43688 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-6P43688 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-6P43688 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-6P43688 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.63■□□□□ 0.57
Nkx2-6P43688 AV356131-201ENSMUST00000206201 750 ntBASIC18.63■□□□□ 0.57
Nkx2-6P43688 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-6P43688 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-6P43688 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-6P43688 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-6P43688 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.63■□□□□ 0.57
Nkx2-6P43688 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-6P43688 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx2-6P43688 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx2-6P43688 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.62■□□□□ 0.57
Nkx2-6P43688 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx2-6P43688 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.62■□□□□ 0.57
Nkx2-6P43688 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx2-6P43688 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx2-6P43688 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx2-6P43688 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx2-6P43688 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx2-6P43688 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx2-6P43688 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-6P43688 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-6P43688 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-6P43688 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-6P43688 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-6P43688 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-6P43688 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-6P43688 Gm29257-201ENSMUST00000186115 639 ntBASIC18.61■□□□□ 0.57
Nkx2-6P43688 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.61■□□□□ 0.57
Nkx2-6P43688 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Nkx2-6P43688 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Nkx2-6P43688 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-6P43688 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.6■□□□□ 0.57
Nkx2-6P43688 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.6■□□□□ 0.57
Nkx2-6P43688 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-6P43688 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Nkx2-6P43688 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-6P43688 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-6P43688 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Nkx2-6P43688 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-6P43688 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-6P43688 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-6P43688 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-6P43688 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-6P43688 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-6P43688 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-6P43688 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms