Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sox18P43680 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sox18P43680 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox18P43680 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.94■□□□□ 0.62
Sox18P43680 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Sox18P43680 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.94■□□□□ 0.62
Sox18P43680 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox18P43680 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox18P43680 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Sox18P43680 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.94■□□□□ 0.62
Sox18P43680 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sox18P43680 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Sox18P43680 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox18P43680 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox18P43680 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sox18P43680 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Sox18P43680 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox18P43680 Gm10812-201ENSMUST00000099864 546 ntBASIC18.93■□□□□ 0.62
Sox18P43680 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox18P43680 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox18P43680 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Sox18P43680 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox18P43680 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox18P43680 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sox18P43680 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Sox18P43680 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox18P43680 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Sox18P43680 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox18P43680 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox18P43680 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sox18P43680 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox18P43680 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Sox18P43680 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox18P43680 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox18P43680 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox18P43680 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox18P43680 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.91■□□□□ 0.62
Sox18P43680 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox18P43680 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Sox18P43680 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox18P43680 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sox18P43680 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox18P43680 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.9■□□□□ 0.62
Sox18P43680 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox18P43680 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox18P43680 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sox18P43680 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox18P43680 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Sox18P43680 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox18P43680 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Sox18P43680 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sox18P43680 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
Sox18P43680 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Sox18P43680 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sox18P43680 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox18P43680 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox18P43680 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Sox18P43680 Mir6982-201ENSMUST00000184354 68 ntBASIC18.89■□□□□ 0.61
Sox18P43680 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.89■□□□□ 0.61
Sox18P43680 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox18P43680 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox18P43680 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sox18P43680 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox18P43680 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox18P43680 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox18P43680 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox18P43680 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sox18P43680 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sox18P43680 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.88■□□□□ 0.61
Sox18P43680 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.88■□□□□ 0.61
Sox18P43680 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.88■□□□□ 0.61
Sox18P43680 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sox18P43680 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox18P43680 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox18P43680 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sox18P43680 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox18P43680 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sox18P43680 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.87■□□□□ 0.61
Sox18P43680 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.87■□□□□ 0.61
Sox18P43680 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Sox18P43680 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sox18P43680 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sox18P43680 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox18P43680 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sox18P43680 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.86■□□□□ 0.61
Sox18P43680 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox18P43680 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sox18P43680 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox18P43680 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox18P43680 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sox18P43680 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.86■□□□□ 0.61
Sox18P43680 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.86■□□□□ 0.61
Sox18P43680 Gm5408-201ENSMUST00000197998 747 ntBASIC18.86■□□□□ 0.61
Sox18P43680 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.86■□□□□ 0.61
Sox18P43680 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.86■□□□□ 0.61
Sox18P43680 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sox18P43680 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox18P43680 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.86■□□□□ 0.61
Sox18P43680 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.86■□□□□ 0.61
Sox18P43680 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms