Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Foxa1P35582 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Foxa1P35582 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Foxa1P35582 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Foxa1P35582 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Foxa1P35582 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.26■□□□□ 0.51
Foxa1P35582 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Foxa1P35582 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Foxa1P35582 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.26■□□□□ 0.51
Foxa1P35582 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Foxa1P35582 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Foxa1P35582 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Foxa1P35582 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Foxa1P35582 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Foxa1P35582 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Foxa1P35582 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Foxa1P35582 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Foxa1P35582 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Foxa1P35582 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Foxa1P35582 Mir7075-201ENSMUST00000184187 82 ntBASIC18.25■□□□□ 0.51
Foxa1P35582 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Foxa1P35582 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Foxa1P35582 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Foxa1P35582 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Foxa1P35582 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Foxa1P35582 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Foxa1P35582 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Foxa1P35582 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Foxa1P35582 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Foxa1P35582 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Foxa1P35582 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Foxa1P35582 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Foxa1P35582 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Foxa1P35582 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Foxa1P35582 Gm12251-201ENSMUST00000117893 792 ntBASIC18.24■□□□□ 0.51
Foxa1P35582 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Foxa1P35582 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.24■□□□□ 0.51
Foxa1P35582 Spcs1-204ENSMUST00000226782 949 ntBASIC18.24■□□□□ 0.51
Foxa1P35582 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Foxa1P35582 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Foxa1P35582 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Foxa1P35582 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Foxa1P35582 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Foxa1P35582 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Foxa1P35582 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Foxa1P35582 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Foxa1P35582 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Foxa1P35582 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Foxa1P35582 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Foxa1P35582 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Foxa1P35582 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Foxa1P35582 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Foxa1P35582 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Foxa1P35582 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Foxa1P35582 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Foxa1P35582 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Foxa1P35582 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Foxa1P35582 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.23■□□□□ 0.51
Foxa1P35582 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Foxa1P35582 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Foxa1P35582 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Foxa1P35582 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Foxa1P35582 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Foxa1P35582 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.22■□□□□ 0.51
Foxa1P35582 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.22■□□□□ 0.51
Foxa1P35582 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.22■□□□□ 0.51
Foxa1P35582 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Foxa1P35582 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Foxa1P35582 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Foxa1P35582 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Foxa1P35582 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Foxa1P35582 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Foxa1P35582 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Foxa1P35582 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Foxa1P35582 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Foxa1P35582 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Foxa1P35582 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Foxa1P35582 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Foxa1P35582 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.2■□□□□ 0.5
Foxa1P35582 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxa1P35582 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Foxa1P35582 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxa1P35582 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Foxa1P35582 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxa1P35582 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxa1P35582 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Foxa1P35582 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.2■□□□□ 0.5
Foxa1P35582 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxa1P35582 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Foxa1P35582 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxa1P35582 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Foxa1P35582 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxa1P35582 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxa1P35582 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxa1P35582 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Foxa1P35582 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.2■□□□□ 0.5
Foxa1P35582 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxa1P35582 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxa1P35582 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.19■□□□□ 0.5
Foxa1P35582 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms