Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp13P33435 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp13P33435 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp13P33435 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp13P33435 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp13P33435 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.15■□□□□ 0.82
Mmp13P33435 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Mmp13P33435 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.15■□□□□ 0.82
Mmp13P33435 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp13P33435 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Mmp13P33435 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp13P33435 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.15■□□□□ 0.82
Mmp13P33435 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Mmp13P33435 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Mmp13P33435 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Mmp13P33435 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp13P33435 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp13P33435 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp13P33435 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.14■□□□□ 0.81
Mmp13P33435 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.14■□□□□ 0.81
Mmp13P33435 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp13P33435 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp13P33435 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.14■□□□□ 0.81
Mmp13P33435 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mmp13P33435 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mmp13P33435 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mmp13P33435 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.13■□□□□ 0.81
Mmp13P33435 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.13■□□□□ 0.81
Mmp13P33435 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mmp13P33435 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.13■□□□□ 0.81
Mmp13P33435 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Mmp13P33435 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp13P33435 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp13P33435 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp13P33435 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp13P33435 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Mmp13P33435 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp13P33435 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp13P33435 Gm13241-201ENSMUST00000094493 780 ntBASIC20.12■□□□□ 0.81
Mmp13P33435 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp13P33435 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp13P33435 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp13P33435 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp13P33435 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.11■□□□□ 0.81
Mmp13P33435 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp13P33435 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp13P33435 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Mmp13P33435 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp13P33435 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp13P33435 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Mmp13P33435 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Mmp13P33435 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Mmp13P33435 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Mmp13P33435 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Mmp13P33435 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp13P33435 Gm12922-201ENSMUST00000120626 809 ntBASIC20.1■□□□□ 0.81
Mmp13P33435 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.1■□□□□ 0.81
Mmp13P33435 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp13P33435 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp13P33435 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp13P33435 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp13P33435 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp13P33435 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp13P33435 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.09■□□□□ 0.81
Mmp13P33435 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp13P33435 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.09■□□□□ 0.81
Mmp13P33435 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp13P33435 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp13P33435 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp13P33435 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Mmp13P33435 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp13P33435 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp13P33435 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp13P33435 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp13P33435 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Mmp13P33435 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp13P33435 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp13P33435 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Mmp13P33435 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.08■□□□□ 0.81
Mmp13P33435 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.08■□□□□ 0.81
Mmp13P33435 Gm7143-201ENSMUST00000222811 859 ntBASIC20.08■□□□□ 0.81
Mmp13P33435 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Mmp13P33435 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Mmp13P33435 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Mmp13P33435 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Mmp13P33435 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp13P33435 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp13P33435 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Mmp13P33435 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp13P33435 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp13P33435 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp13P33435 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.07■□□□□ 0.8
Mmp13P33435 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Mmp13P33435 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.07■□□□□ 0.8
Mmp13P33435 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Mmp13P33435 Gm9870-201ENSMUST00000063874 645 ntBASIC20.07■□□□□ 0.8
Mmp13P33435 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp13P33435 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.07■□□□□ 0.8
Mmp13P33435 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp13P33435 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms