Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a13P31649 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a13P31649 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a13P31649 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a13P31649 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a13P31649 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.08■□□□□ 0.81
Slc6a13P31649 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a13P31649 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a13P31649 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a13P31649 Gm12821-201ENSMUST00000120022 600 ntBASIC20.08■□□□□ 0.81
Slc6a13P31649 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Slc6a13P31649 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a13P31649 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a13P31649 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a13P31649 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a13P31649 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a13P31649 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a13P31649 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a13P31649 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Slc6a13P31649 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.07■□□□□ 0.8
Slc6a13P31649 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Slc6a13P31649 Spcs1-204ENSMUST00000226782 949 ntBASIC20.07■□□□□ 0.8
Slc6a13P31649 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a13P31649 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Slc6a13P31649 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a13P31649 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Slc6a13P31649 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a13P31649 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a13P31649 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Slc6a13P31649 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a13P31649 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.06■□□□□ 0.8
Slc6a13P31649 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.06■□□□□ 0.8
Slc6a13P31649 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Slc6a13P31649 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Slc6a13P31649 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a13P31649 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a13P31649 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a13P31649 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a13P31649 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Slc6a13P31649 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.05■□□□□ 0.8
Slc6a13P31649 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.05■□□□□ 0.8
Slc6a13P31649 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a13P31649 Mir7075-201ENSMUST00000184187 82 ntBASIC20.05■□□□□ 0.8
Slc6a13P31649 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.05■□□□□ 0.8
Slc6a13P31649 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a13P31649 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a13P31649 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a13P31649 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a13P31649 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a13P31649 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a13P31649 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a13P31649 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a13P31649 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
Slc6a13P31649 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a13P31649 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a13P31649 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a13P31649 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.04■□□□□ 0.8
Slc6a13P31649 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Slc6a13P31649 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a13P31649 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.04■□□□□ 0.8
Slc6a13P31649 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a13P31649 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a13P31649 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a13P31649 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.03■□□□□ 0.8
Slc6a13P31649 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.03■□□□□ 0.8
Slc6a13P31649 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a13P31649 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.03■□□□□ 0.8
Slc6a13P31649 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Slc6a13P31649 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a13P31649 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a13P31649 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a13P31649 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.02■□□□□ 0.8
Slc6a13P31649 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Slc6a13P31649 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a13P31649 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a13P31649 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a13P31649 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.02■□□□□ 0.8
Slc6a13P31649 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.02■□□□□ 0.8
Slc6a13P31649 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.02■□□□□ 0.8
Slc6a13P31649 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a13P31649 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a13P31649 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Slc6a13P31649 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a13P31649 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a13P31649 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Slc6a13P31649 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a13P31649 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Slc6a13P31649 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a13P31649 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.01■□□□□ 0.79
Slc6a13P31649 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a13P31649 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a13P31649 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a13P31649 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a13P31649 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a13P31649 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a13P31649 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a13P31649 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a13P31649 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20■□□□□ 0.79
Slc6a13P31649 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Slc6a13P31649 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms