Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Nckap1P28660 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Nckap1P28660 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Nckap1P28660 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nckap1P28660 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nckap1P28660 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nckap1P28660 Gm9988-201ENSMUST00000069786 435 ntBASIC19.63■□□□□ 0.73
Nckap1P28660 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nckap1P28660 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nckap1P28660 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nckap1P28660 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nckap1P28660 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.62■□□□□ 0.73
Nckap1P28660 Gm29257-201ENSMUST00000186115 639 ntBASIC19.62■□□□□ 0.73
Nckap1P28660 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.62■□□□□ 0.73
Nckap1P28660 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nckap1P28660 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nckap1P28660 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nckap1P28660 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nckap1P28660 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
Nckap1P28660 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Nckap1P28660 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nckap1P28660 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nckap1P28660 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.61■□□□□ 0.73
Nckap1P28660 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nckap1P28660 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nckap1P28660 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nckap1P28660 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nckap1P28660 Gm10849-201ENSMUST00000100397 618 ntBASIC19.6■□□□□ 0.73
Nckap1P28660 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.6■□□□□ 0.73
Nckap1P28660 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nckap1P28660 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nckap1P28660 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nckap1P28660 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.6■□□□□ 0.73
Nckap1P28660 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nckap1P28660 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nckap1P28660 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nckap1P28660 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nckap1P28660 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.59■□□□□ 0.73
Nckap1P28660 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nckap1P28660 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nckap1P28660 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nckap1P28660 AV356131-201ENSMUST00000206201 750 ntBASIC19.59■□□□□ 0.73
Nckap1P28660 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nckap1P28660 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nckap1P28660 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nckap1P28660 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nckap1P28660 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nckap1P28660 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nckap1P28660 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nckap1P28660 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nckap1P28660 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.58■□□□□ 0.72
Nckap1P28660 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nckap1P28660 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.58■□□□□ 0.72
Nckap1P28660 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nckap1P28660 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nckap1P28660 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nckap1P28660 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nckap1P28660 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nckap1P28660 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Nckap1P28660 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.57■□□□□ 0.72
Nckap1P28660 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nckap1P28660 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nckap1P28660 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Nckap1P28660 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nckap1P28660 Gm10033-202ENSMUST00000211874 928 ntBASIC19.57■□□□□ 0.72
Nckap1P28660 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Nckap1P28660 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nckap1P28660 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.57■□□□□ 0.72
Nckap1P28660 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.57■□□□□ 0.72
Nckap1P28660 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nckap1P28660 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nckap1P28660 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nckap1P28660 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nckap1P28660 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nckap1P28660 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nckap1P28660 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nckap1P28660 Gm27801-201ENSMUST00000184174 223 ntBASIC19.56■□□□□ 0.72
Nckap1P28660 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nckap1P28660 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nckap1P28660 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nckap1P28660 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nckap1P28660 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nckap1P28660 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.55■□□□□ 0.72
Nckap1P28660 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nckap1P28660 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nckap1P28660 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nckap1P28660 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.55■□□□□ 0.72
Nckap1P28660 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nckap1P28660 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.55■□□□□ 0.72
Nckap1P28660 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nckap1P28660 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.54■□□□□ 0.72
Nckap1P28660 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nckap1P28660 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nckap1P28660 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nckap1P28660 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nckap1P28660 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.54■□□□□ 0.72
Nckap1P28660 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Nckap1P28660 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nckap1P28660 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Nckap1P28660 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms