Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hmga1P17095 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hmga1P17095 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hmga1P17095 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.33■□□□□ 0.84
Hmga1P17095 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
Hmga1P17095 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Hmga1P17095 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.33■□□□□ 0.84
Hmga1P17095 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmga1P17095 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmga1P17095 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hmga1P17095 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.32■□□□□ 0.84
Hmga1P17095 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmga1P17095 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.32■□□□□ 0.84
Hmga1P17095 Gm27405-201ENSMUST00000184201 112 ntBASIC20.32■□□□□ 0.84
Hmga1P17095 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Hmga1P17095 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Hmga1P17095 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.32■□□□□ 0.84
Hmga1P17095 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmga1P17095 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmga1P17095 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hmga1P17095 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hmga1P17095 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmga1P17095 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.31■□□□□ 0.84
Hmga1P17095 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmga1P17095 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.31■□□□□ 0.84
Hmga1P17095 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.31■□□□□ 0.84
Hmga1P17095 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Hmga1P17095 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmga1P17095 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hmga1P17095 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hmga1P17095 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hmga1P17095 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmga1P17095 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hmga1P17095 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmga1P17095 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmga1P17095 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.29■□□□□ 0.84
Hmga1P17095 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Hmga1P17095 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Hmga1P17095 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.29■□□□□ 0.84
Hmga1P17095 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Hmga1P17095 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Hmga1P17095 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hmga1P17095 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmga1P17095 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Hmga1P17095 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hmga1P17095 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmga1P17095 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.28■□□□□ 0.84
Hmga1P17095 Gm18671-201ENSMUST00000214826 683 ntBASIC20.28■□□□□ 0.84
Hmga1P17095 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hmga1P17095 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Hmga1P17095 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmga1P17095 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmga1P17095 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.27■□□□□ 0.84
Hmga1P17095 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hmga1P17095 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Hmga1P17095 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmga1P17095 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Hmga1P17095 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hmga1P17095 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmga1P17095 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.27■□□□□ 0.84
Hmga1P17095 Gm42778-201ENSMUST00000199644 553 ntBASIC20.27■□□□□ 0.84
Hmga1P17095 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hmga1P17095 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmga1P17095 Gm9988-201ENSMUST00000069786 435 ntBASIC20.27■□□□□ 0.84
Hmga1P17095 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.27■□□□□ 0.83
Hmga1P17095 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hmga1P17095 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Hmga1P17095 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmga1P17095 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmga1P17095 AV356131-201ENSMUST00000206201 750 ntBASIC20.26■□□□□ 0.83
Hmga1P17095 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmga1P17095 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Hmga1P17095 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Hmga1P17095 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.26■□□□□ 0.83
Hmga1P17095 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmga1P17095 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hmga1P17095 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hmga1P17095 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Hmga1P17095 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hmga1P17095 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.25■□□□□ 0.83
Hmga1P17095 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmga1P17095 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmga1P17095 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Hmga1P17095 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmga1P17095 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.25■□□□□ 0.83
Hmga1P17095 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.25■□□□□ 0.83
Hmga1P17095 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmga1P17095 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmga1P17095 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmga1P17095 AA386476-201ENSMUST00000098781 1665 ntBASIC20.24■□□□□ 0.83
Hmga1P17095 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hmga1P17095 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmga1P17095 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmga1P17095 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Hmga1P17095 Reep4-203ENSMUST00000226563 1444 ntBASIC20.24■□□□□ 0.83
Hmga1P17095 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmga1P17095 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmga1P17095 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmga1P17095 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmga1P17095 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms