Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
P04946 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P04946 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.01■□□□□ 0.31
P04946 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
P04946 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04946 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
P04946 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
P04946 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17■□□□□ 0.31
P04946 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
P04946 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P04946 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17■□□□□ 0.31
P04946 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17■□□□□ 0.31
P04946 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17■□□□□ 0.31
P04946 Gm27801-201ENSMUST00000184174 223 ntBASIC17■□□□□ 0.31
P04946 Slc35b2-207ENSMUST00000226086 850 ntBASIC17■□□□□ 0.31
P04946 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P04946 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17■□□□□ 0.31
P04946 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P04946 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17■□□□□ 0.31
P04946 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
P04946 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
P04946 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
P04946 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P04946 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
P04946 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.99■□□□□ 0.31
P04946 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.99■□□□□ 0.31
P04946 Gm42642-201ENSMUST00000200683 355 ntBASIC16.99■□□□□ 0.31
P04946 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.99■□□□□ 0.31
P04946 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
P04946 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P04946 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.99■□□□□ 0.31
P04946 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
P04946 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
P04946 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
P04946 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
P04946 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P04946 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
P04946 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
P04946 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.98■□□□□ 0.31
P04946 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
P04946 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
P04946 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.98■□□□□ 0.31
P04946 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
P04946 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.98■□□□□ 0.31
P04946 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
P04946 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P04946 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
P04946 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.97■□□□□ 0.31
P04946 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.97■□□□□ 0.31
P04946 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.97■□□□□ 0.31
P04946 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04946 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04946 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
P04946 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
P04946 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
P04946 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.96■□□□□ 0.31
P04946 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04946 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04946 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
P04946 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04946 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.96■□□□□ 0.31
P04946 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
P04946 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
P04946 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04946 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04946 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04946 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04946 AA386476-201ENSMUST00000098781 1665 ntBASIC16.95■□□□□ 0.3
P04946 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04946 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
P04946 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.95■□□□□ 0.3
P04946 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.95■□□□□ 0.3
P04946 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
P04946 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.95■□□□□ 0.3
P04946 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
P04946 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04946 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
P04946 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04946 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04946 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04946 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
P04946 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04946 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04946 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04946 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04946 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04946 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04946 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
P04946 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04946 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
P04946 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04946 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04946 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04946 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04946 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04946 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.93■□□□□ 0.3
P04946 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.93■□□□□ 0.3
P04946 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04946 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04946 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms