Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chrna1P04756 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Chrna1P04756 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.33■■□□□ 1.01
Chrna1P04756 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chrna1P04756 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chrna1P04756 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chrna1P04756 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chrna1P04756 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Chrna1P04756 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Chrna1P04756 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Chrna1P04756 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Chrna1P04756 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Chrna1P04756 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Chrna1P04756 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
Chrna1P04756 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chrna1P04756 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.32■■□□□ 1
Chrna1P04756 Gm27801-201ENSMUST00000184174 223 ntBASIC21.32■■□□□ 1
Chrna1P04756 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.32■■□□□ 1
Chrna1P04756 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chrna1P04756 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chrna1P04756 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.32■■□□□ 1
Chrna1P04756 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chrna1P04756 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chrna1P04756 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chrna1P04756 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.32■■□□□ 1
Chrna1P04756 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chrna1P04756 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.32■■□□□ 1
Chrna1P04756 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Chrna1P04756 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.31■■□□□ 1
Chrna1P04756 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Chrna1P04756 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.31■■□□□ 1
Chrna1P04756 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.31■■□□□ 1
Chrna1P04756 Gm9988-201ENSMUST00000069786 435 ntBASIC21.31■■□□□ 1
Chrna1P04756 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chrna1P04756 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chrna1P04756 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chrna1P04756 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.3■■□□□ 1
Chrna1P04756 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.3■■□□□ 1
Chrna1P04756 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.3■■□□□ 1
Chrna1P04756 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Chrna1P04756 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Chrna1P04756 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.3■■□□□ 1
Chrna1P04756 Gm42778-201ENSMUST00000199644 553 ntBASIC21.3■■□□□ 1
Chrna1P04756 Gm18671-201ENSMUST00000214826 683 ntBASIC21.3■■□□□ 1
Chrna1P04756 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chrna1P04756 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chrna1P04756 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.3■■□□□ 1
Chrna1P04756 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Chrna1P04756 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.29■■□□□ 1
Chrna1P04756 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.29■■□□□ 1
Chrna1P04756 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.29■■□□□ 1
Chrna1P04756 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Chrna1P04756 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.29■■□□□ 1
Chrna1P04756 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.29■■□□□ 1
Chrna1P04756 Gm29257-201ENSMUST00000186115 639 ntBASIC21.29■■□□□ 1
Chrna1P04756 AV356131-201ENSMUST00000206201 750 ntBASIC21.29■■□□□ 1
Chrna1P04756 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.29■■□□□ 1
Chrna1P04756 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Chrna1P04756 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.29■■□□□ 1
Chrna1P04756 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.29■■□□□ 1
Chrna1P04756 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Chrna1P04756 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Chrna1P04756 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.28■■□□□ 1
Chrna1P04756 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.28■■□□□ 1
Chrna1P04756 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Chrna1P04756 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Chrna1P04756 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Chrna1P04756 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Chrna1P04756 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Chrna1P04756 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.28■■□□□ 1
Chrna1P04756 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chrna1P04756 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.28■■□□□ 1
Chrna1P04756 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chrna1P04756 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.27■■□□□ 1
Chrna1P04756 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.27■■□□□ 1
Chrna1P04756 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Chrna1P04756 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.27■■□□□ 1
Chrna1P04756 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Chrna1P04756 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.27■■□□□ 1
Chrna1P04756 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Chrna1P04756 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Chrna1P04756 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Chrna1P04756 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Chrna1P04756 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.26■□□□□ 0.99
Chrna1P04756 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Chrna1P04756 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.26■□□□□ 0.99
Chrna1P04756 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.26■□□□□ 0.99
Chrna1P04756 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chrna1P04756 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Chrna1P04756 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Chrna1P04756 Reep4-203ENSMUST00000226563 1444 ntBASIC21.26■□□□□ 0.99
Chrna1P04756 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chrna1P04756 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chrna1P04756 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Chrna1P04756 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.26■□□□□ 0.99
Chrna1P04756 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Chrna1P04756 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chrna1P04756 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Chrna1P04756 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Chrna1P04756 Gm37179-201ENSMUST00000194862 823 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms