Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.45■□□□□ 0.22
Cd74P04441 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd74P04441 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd74P04441 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd74P04441 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd74P04441 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd74P04441 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cd74P04441 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd74P04441 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Cd74P04441 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd74P04441 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.44■□□□□ 0.22
Cd74P04441 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd74P04441 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd74P04441 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd74P04441 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.44■□□□□ 0.22
Cd74P04441 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd74P04441 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd74P04441 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd74P04441 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cd74P04441 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.44■□□□□ 0.22
Cd74P04441 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Cd74P04441 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cd74P04441 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd74P04441 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd74P04441 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cd74P04441 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd74P04441 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd74P04441 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd74P04441 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd74P04441 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cd74P04441 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cd74P04441 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.43■□□□□ 0.22
Cd74P04441 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.43■□□□□ 0.22
Cd74P04441 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cd74P04441 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cd74P04441 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cd74P04441 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cd74P04441 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.43■□□□□ 0.22
Cd74P04441 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cd74P04441 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.43■□□□□ 0.22
Cd74P04441 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.43■□□□□ 0.22
Cd74P04441 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cd74P04441 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.43■□□□□ 0.22
Cd74P04441 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.43■□□□□ 0.22
Cd74P04441 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.43■□□□□ 0.22
Cd74P04441 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cd74P04441 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cd74P04441 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cd74P04441 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Cd74P04441 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cd74P04441 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.42■□□□□ 0.22
Cd74P04441 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.42■□□□□ 0.22
Cd74P04441 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.42■□□□□ 0.22
Cd74P04441 Serp2-204ENSMUST00000228055 705 ntBASIC16.42■□□□□ 0.22
Cd74P04441 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cd74P04441 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Cd74P04441 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cd74P04441 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cd74P04441 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd74P04441 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd74P04441 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd74P04441 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd74P04441 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd74P04441 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd74P04441 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
Cd74P04441 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd74P04441 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cd74P04441 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd74P04441 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
Cd74P04441 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
Cd74P04441 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Cd74P04441 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd74P04441 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cd74P04441 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd74P04441 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd74P04441 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd74P04441 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cd74P04441 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cd74P04441 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.4■□□□□ 0.22
Cd74P04441 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd74P04441 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd74P04441 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd74P04441 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd74P04441 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd74P04441 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.4■□□□□ 0.22
Cd74P04441 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cd74P04441 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cd74P04441 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cd74P04441 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cd74P04441 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Cd74P04441 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.39■□□□□ 0.21
Cd74P04441 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cd74P04441 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cd74P04441 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cd74P04441 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cd74P04441 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Cd74P04441 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd74P04441 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd74P04441 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd74P04441 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms