Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tp53P02340 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tp53P02340 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Tp53P02340 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Tp53P02340 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tp53P02340 Gm43137-201ENSMUST00000198052 594 ntBASIC21.37■■□□□ 1.01
Tp53P02340 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tp53P02340 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Tp53P02340 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tp53P02340 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
Tp53P02340 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tp53P02340 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.36■■□□□ 1.01
Tp53P02340 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tp53P02340 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tp53P02340 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Tp53P02340 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Tp53P02340 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.36■■□□□ 1.01
Tp53P02340 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.36■■□□□ 1.01
Tp53P02340 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.36■■□□□ 1.01
Tp53P02340 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tp53P02340 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tp53P02340 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tp53P02340 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.36■■□□□ 1.01
Tp53P02340 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tp53P02340 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tp53P02340 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
Tp53P02340 Gm12251-201ENSMUST00000117893 792 ntBASIC21.35■■□□□ 1.01
Tp53P02340 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tp53P02340 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.35■■□□□ 1.01
Tp53P02340 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.35■■□□□ 1.01
Tp53P02340 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tp53P02340 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tp53P02340 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.34■■□□□ 1.01
Tp53P02340 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tp53P02340 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tp53P02340 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tp53P02340 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tp53P02340 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
Tp53P02340 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tp53P02340 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tp53P02340 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tp53P02340 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Tp53P02340 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.34■■□□□ 1.01
Tp53P02340 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tp53P02340 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tp53P02340 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tp53P02340 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tp53P02340 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tp53P02340 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.33■■□□□ 1.01
Tp53P02340 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.33■■□□□ 1.01
Tp53P02340 Spcs1-204ENSMUST00000226782 949 ntBASIC21.33■■□□□ 1.01
Tp53P02340 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tp53P02340 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.33■■□□□ 1
Tp53P02340 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
Tp53P02340 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tp53P02340 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Tp53P02340 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tp53P02340 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tp53P02340 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tp53P02340 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Tp53P02340 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tp53P02340 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.31■■□□□ 1
Tp53P02340 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.31■■□□□ 1
Tp53P02340 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Tp53P02340 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tp53P02340 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tp53P02340 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Tp53P02340 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Tp53P02340 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tp53P02340 Gm12821-201ENSMUST00000120022 600 ntBASIC21.31■■□□□ 1
Tp53P02340 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.31■■□□□ 1
Tp53P02340 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Tp53P02340 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.31■■□□□ 1
Tp53P02340 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tp53P02340 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tp53P02340 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tp53P02340 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tp53P02340 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tp53P02340 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Tp53P02340 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tp53P02340 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Tp53P02340 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.3■■□□□ 1
Tp53P02340 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tp53P02340 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tp53P02340 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tp53P02340 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tp53P02340 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Tp53P02340 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tp53P02340 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tp53P02340 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tp53P02340 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
Tp53P02340 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Tp53P02340 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Tp53P02340 AA386476-201ENSMUST00000098781 1665 ntBASIC21.29■■□□□ 1
Tp53P02340 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Tp53P02340 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Tp53P02340 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.29■■□□□ 1
Tp53P02340 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tp53P02340 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Tp53P02340 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms