Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
P01734 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
P01734 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
P01734 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P01734 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
P01734 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P01734 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
P01734 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
P01734 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P01734 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
P01734 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.52■■□□□ 1.04
P01734 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
P01734 Gm40848-201ENSMUST00000221998 324 ntBASIC21.52■■□□□ 1.04
P01734 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
P01734 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
P01734 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
P01734 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
P01734 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
P01734 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.51■■□□□ 1.03
P01734 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
P01734 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
P01734 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.51■■□□□ 1.03
P01734 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
P01734 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
P01734 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
P01734 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
P01734 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
P01734 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
P01734 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
P01734 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
P01734 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
P01734 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
P01734 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.5■■□□□ 1.03
P01734 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
P01734 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
P01734 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
P01734 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.49■■□□□ 1.03
P01734 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
P01734 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
P01734 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.49■■□□□ 1.03
P01734 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
P01734 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
P01734 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
P01734 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.48■■□□□ 1.03
P01734 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.48■■□□□ 1.03
P01734 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
P01734 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
P01734 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.48■■□□□ 1.03
P01734 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
P01734 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
P01734 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
P01734 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
P01734 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
P01734 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
P01734 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
P01734 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
P01734 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
P01734 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
P01734 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.47■■□□□ 1.03
P01734 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
P01734 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
P01734 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
P01734 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
P01734 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
P01734 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
P01734 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
P01734 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
P01734 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
P01734 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.47■■□□□ 1.03
P01734 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
P01734 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
P01734 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
P01734 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
P01734 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
P01734 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.46■■□□□ 1.03
P01734 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
P01734 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
P01734 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
P01734 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
P01734 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
P01734 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
P01734 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
P01734 Gm43060-201ENSMUST00000200621 289 ntBASIC21.45■■□□□ 1.02
P01734 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
P01734 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
P01734 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.45■■□□□ 1.02
P01734 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
P01734 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
P01734 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
P01734 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
P01734 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
P01734 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
P01734 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
P01734 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
P01734 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
P01734 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
P01734 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
P01734 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
P01734 Gm11421-201ENSMUST00000122124 294 ntBASIC21.43■■□□□ 1.02
P01734 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms