Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hcn3O88705 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hcn3O88705 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hcn3O88705 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Hcn3O88705 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hcn3O88705 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hcn3O88705 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hcn3O88705 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hcn3O88705 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Hcn3O88705 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.84■□□□□ 0.61
Hcn3O88705 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.84■□□□□ 0.61
Hcn3O88705 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Hcn3O88705 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hcn3O88705 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hcn3O88705 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hcn3O88705 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Hcn3O88705 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hcn3O88705 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hcn3O88705 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hcn3O88705 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Hcn3O88705 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hcn3O88705 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Hcn3O88705 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hcn3O88705 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Hcn3O88705 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Hcn3O88705 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hcn3O88705 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hcn3O88705 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hcn3O88705 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Hcn3O88705 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Hcn3O88705 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hcn3O88705 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hcn3O88705 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hcn3O88705 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hcn3O88705 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hcn3O88705 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hcn3O88705 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Hcn3O88705 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hcn3O88705 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hcn3O88705 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Hcn3O88705 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hcn3O88705 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hcn3O88705 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcn3O88705 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcn3O88705 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hcn3O88705 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hcn3O88705 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.81■□□□□ 0.6
Hcn3O88705 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hcn3O88705 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcn3O88705 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Hcn3O88705 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hcn3O88705 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcn3O88705 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Hcn3O88705 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hcn3O88705 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hcn3O88705 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hcn3O88705 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hcn3O88705 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Hcn3O88705 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.8■□□□□ 0.6
Hcn3O88705 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hcn3O88705 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Hcn3O88705 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Hcn3O88705 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hcn3O88705 Gm5812-201ENSMUST00000061073 957 ntBASIC18.8■□□□□ 0.6
Hcn3O88705 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.8■□□□□ 0.6
Hcn3O88705 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.8■□□□□ 0.6
Hcn3O88705 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hcn3O88705 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hcn3O88705 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.8■□□□□ 0.6
Hcn3O88705 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Hcn3O88705 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn3O88705 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hcn3O88705 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn3O88705 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn3O88705 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn3O88705 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn3O88705 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn3O88705 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn3O88705 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn3O88705 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.79■□□□□ 0.6
Hcn3O88705 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Hcn3O88705 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn3O88705 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn3O88705 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn3O88705 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn3O88705 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn3O88705 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn3O88705 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn3O88705 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.79■□□□□ 0.6
Hcn3O88705 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Hcn3O88705 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn3O88705 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn3O88705 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Hcn3O88705 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hcn3O88705 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Hcn3O88705 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hcn3O88705 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hcn3O88705 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hcn3O88705 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.78■□□□□ 0.6
Hcn3O88705 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms