Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.99■□□□□ 0.63
Dnmt3bO88509 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.99■□□□□ 0.63
Dnmt3bO88509 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
Dnmt3bO88509 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.99■□□□□ 0.63
Dnmt3bO88509 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Dnmt3bO88509 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Dnmt3bO88509 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dnmt3bO88509 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.98■□□□□ 0.63
Dnmt3bO88509 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dnmt3bO88509 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dnmt3bO88509 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dnmt3bO88509 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dnmt3bO88509 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Dnmt3bO88509 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dnmt3bO88509 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dnmt3bO88509 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dnmt3bO88509 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.98■□□□□ 0.63
Dnmt3bO88509 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.98■□□□□ 0.63
Dnmt3bO88509 Golgb1-201ENSMUST00000023534 498 ntBASIC18.98■□□□□ 0.63
Dnmt3bO88509 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dnmt3bO88509 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dnmt3bO88509 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dnmt3bO88509 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dnmt3bO88509 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Dnmt3bO88509 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Dnmt3bO88509 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.97■□□□□ 0.63
Dnmt3bO88509 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.97■□□□□ 0.63
Dnmt3bO88509 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Dnmt3bO88509 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Dnmt3bO88509 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Dnmt3bO88509 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Dnmt3bO88509 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.96■□□□□ 0.63
Dnmt3bO88509 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Dnmt3bO88509 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Dnmt3bO88509 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Dnmt3bO88509 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Dnmt3bO88509 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.96■□□□□ 0.63
Dnmt3bO88509 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Dnmt3bO88509 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Dnmt3bO88509 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Dnmt3bO88509 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.96■□□□□ 0.63
Dnmt3bO88509 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Dnmt3bO88509 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Dnmt3bO88509 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Dnmt3bO88509 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.96■□□□□ 0.63
Dnmt3bO88509 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Dnmt3bO88509 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Dnmt3bO88509 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Dnmt3bO88509 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Dnmt3bO88509 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Dnmt3bO88509 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Dnmt3bO88509 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.95■□□□□ 0.62
Dnmt3bO88509 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.95■□□□□ 0.62
Dnmt3bO88509 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Dnmt3bO88509 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Dnmt3bO88509 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Dnmt3bO88509 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.95■□□□□ 0.62
Dnmt3bO88509 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Dnmt3bO88509 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
Dnmt3bO88509 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Dnmt3bO88509 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Dnmt3bO88509 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Dnmt3bO88509 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Dnmt3bO88509 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Dnmt3bO88509 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Dnmt3bO88509 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
Dnmt3bO88509 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.94■□□□□ 0.62
Dnmt3bO88509 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Dnmt3bO88509 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Dnmt3bO88509 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.94■□□□□ 0.62
Dnmt3bO88509 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
Dnmt3bO88509 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Dnmt3bO88509 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.94■□□□□ 0.62
Dnmt3bO88509 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.94■□□□□ 0.62
Dnmt3bO88509 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Dnmt3bO88509 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Dnmt3bO88509 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Dnmt3bO88509 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.93■□□□□ 0.62
Dnmt3bO88509 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Dnmt3bO88509 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Dnmt3bO88509 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Dnmt3bO88509 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Dnmt3bO88509 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Dnmt3bO88509 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.93■□□□□ 0.62
Dnmt3bO88509 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Dnmt3bO88509 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Dnmt3bO88509 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Dnmt3bO88509 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.92■□□□□ 0.62
Dnmt3bO88509 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Dnmt3bO88509 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Dnmt3bO88509 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Dnmt3bO88509 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Dnmt3bO88509 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Dnmt3bO88509 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Dnmt3bO88509 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Dnmt3bO88509 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Dnmt3bO88509 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Dnmt3bO88509 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Dnmt3bO88509 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Dnmt3bO88509 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms