Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Tnfrsf17O88472 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf17O88472 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.45■□□□□ 0.54
Tnfrsf17O88472 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Tnfrsf17O88472 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Tnfrsf17O88472 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf17O88472 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.45■□□□□ 0.54
Tnfrsf17O88472 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf17O88472 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf17O88472 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf17O88472 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf17O88472 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf17O88472 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.44■□□□□ 0.54
Tnfrsf17O88472 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf17O88472 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf17O88472 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf17O88472 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf17O88472 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.44■□□□□ 0.54
Tnfrsf17O88472 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf17O88472 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf17O88472 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf17O88472 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf17O88472 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf17O88472 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf17O88472 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf17O88472 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf17O88472 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf17O88472 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf17O88472 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf17O88472 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Tnfrsf17O88472 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf17O88472 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf17O88472 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf17O88472 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf17O88472 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Tnfrsf17O88472 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf17O88472 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf17O88472 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf17O88472 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf17O88472 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf17O88472 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf17O88472 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf17O88472 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf17O88472 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf17O88472 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Tnfrsf17O88472 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf17O88472 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.42■□□□□ 0.54
Tnfrsf17O88472 Gm6420-201ENSMUST00000193885 723 ntBASIC18.42■□□□□ 0.54
Tnfrsf17O88472 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf17O88472 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Tnfrsf17O88472 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf17O88472 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf17O88472 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf17O88472 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.41■□□□□ 0.54
Tnfrsf17O88472 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf17O88472 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.41■□□□□ 0.54
Tnfrsf17O88472 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf17O88472 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.41■□□□□ 0.54
Tnfrsf17O88472 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf17O88472 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf17O88472 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf17O88472 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf17O88472 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf17O88472 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tnfrsf17O88472 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.4■□□□□ 0.54
Tnfrsf17O88472 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.4■□□□□ 0.54
Tnfrsf17O88472 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Tnfrsf17O88472 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tnfrsf17O88472 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Tnfrsf17O88472 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf17O88472 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf17O88472 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf17O88472 Gm6576-201ENSMUST00000169678 883 ntBASIC18.39■□□□□ 0.53
Tnfrsf17O88472 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf17O88472 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf17O88472 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf17O88472 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf17O88472 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf17O88472 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf17O88472 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf17O88472 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf17O88472 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Tnfrsf17O88472 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf17O88472 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf17O88472 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf17O88472 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf17O88472 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Tnfrsf17O88472 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.38■□□□□ 0.53
Tnfrsf17O88472 Mir6236-201ENSMUST00000184437 123 ntBASIC18.38■□□□□ 0.53
Tnfrsf17O88472 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.38■□□□□ 0.53
Tnfrsf17O88472 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf17O88472 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.37■□□□□ 0.53
Tnfrsf17O88472 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf17O88472 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf17O88472 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Tnfrsf17O88472 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.37■□□□□ 0.53
Tnfrsf17O88472 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf17O88472 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Tnfrsf17O88472 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf17O88472 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms