Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ttc3O88196 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ttc3O88196 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.92■□□□□ 0.94
Ttc3O88196 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.92■□□□□ 0.94
Ttc3O88196 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ttc3O88196 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.92■□□□□ 0.94
Ttc3O88196 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ttc3O88196 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.92■□□□□ 0.94
Ttc3O88196 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ttc3O88196 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Ttc3O88196 Gm13234-201ENSMUST00000120010 747 ntBASIC20.91■□□□□ 0.94
Ttc3O88196 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.91■□□□□ 0.94
Ttc3O88196 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ttc3O88196 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ttc3O88196 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ttc3O88196 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.9■□□□□ 0.94
Ttc3O88196 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ttc3O88196 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.9■□□□□ 0.94
Ttc3O88196 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ttc3O88196 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ttc3O88196 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.9■□□□□ 0.94
Ttc3O88196 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ttc3O88196 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ttc3O88196 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ttc3O88196 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ttc3O88196 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.9■□□□□ 0.94
Ttc3O88196 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ttc3O88196 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Ttc3O88196 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Ttc3O88196 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.89■□□□□ 0.94
Ttc3O88196 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.89■□□□□ 0.94
Ttc3O88196 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ttc3O88196 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.89■□□□□ 0.93
Ttc3O88196 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ttc3O88196 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.89■□□□□ 0.93
Ttc3O88196 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Ttc3O88196 Gm18671-201ENSMUST00000214826 683 ntBASIC20.89■□□□□ 0.93
Ttc3O88196 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ttc3O88196 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.89■□□□□ 0.93
Ttc3O88196 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.89■□□□□ 0.93
Ttc3O88196 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.89■□□□□ 0.93
Ttc3O88196 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ttc3O88196 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ttc3O88196 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ttc3O88196 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ttc3O88196 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ttc3O88196 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ttc3O88196 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ttc3O88196 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ttc3O88196 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ttc3O88196 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ttc3O88196 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ttc3O88196 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Ttc3O88196 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.88■□□□□ 0.93
Ttc3O88196 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
Ttc3O88196 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ttc3O88196 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ttc3O88196 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ttc3O88196 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ttc3O88196 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.87■□□□□ 0.93
Ttc3O88196 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.87■□□□□ 0.93
Ttc3O88196 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ttc3O88196 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ttc3O88196 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ttc3O88196 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ttc3O88196 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ttc3O88196 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ttc3O88196 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ttc3O88196 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ttc3O88196 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.86■□□□□ 0.93
Ttc3O88196 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ttc3O88196 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ttc3O88196 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ttc3O88196 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc3O88196 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ttc3O88196 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ttc3O88196 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc3O88196 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ttc3O88196 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.85■□□□□ 0.93
Ttc3O88196 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc3O88196 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Ttc3O88196 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.85■□□□□ 0.93
Ttc3O88196 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ttc3O88196 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.85■□□□□ 0.93
Ttc3O88196 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ttc3O88196 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ttc3O88196 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Ttc3O88196 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ttc3O88196 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.84■□□□□ 0.93
Ttc3O88196 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ttc3O88196 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.84■□□□□ 0.93
Ttc3O88196 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ttc3O88196 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ttc3O88196 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ttc3O88196 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Ttc3O88196 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ttc3O88196 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ttc3O88196 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ttc3O88196 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Ttc3O88196 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms