Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm42555-201ENSMUST00000199304 1039 ntBASIC26.1■■□□□ 1.77
Ubr1O70481 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ubr1O70481 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Ubr1O70481 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ubr1O70481 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ubr1O70481 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ubr1O70481 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC26.09■■□□□ 1.77
Ubr1O70481 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ubr1O70481 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
Ubr1O70481 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC26.09■■□□□ 1.77
Ubr1O70481 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Ubr1O70481 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ubr1O70481 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ubr1O70481 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ubr1O70481 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
Ubr1O70481 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ubr1O70481 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
Ubr1O70481 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.76
Ubr1O70481 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ubr1O70481 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC26.07■■□□□ 1.76
Ubr1O70481 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC26.07■■□□□ 1.76
Ubr1O70481 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Ubr1O70481 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ubr1O70481 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Ubr1O70481 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ubr1O70481 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Ubr1O70481 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ubr1O70481 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC26.07■■□□□ 1.76
Ubr1O70481 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Ubr1O70481 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ubr1O70481 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC26.07■■□□□ 1.76
Ubr1O70481 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC26.07■■□□□ 1.76
Ubr1O70481 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ubr1O70481 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Ubr1O70481 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC26.06■■□□□ 1.76
Ubr1O70481 Gm43859-201ENSMUST00000200075 1412 ntBASIC26.06■■□□□ 1.76
Ubr1O70481 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Ubr1O70481 Gm38205-201ENSMUST00000192243 258 ntBASIC26.06■■□□□ 1.76
Ubr1O70481 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC26.06■■□□□ 1.76
Ubr1O70481 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC26.06■■□□□ 1.76
Ubr1O70481 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ubr1O70481 Gm12504-201ENSMUST00000120860 2231 ntBASIC26.06■■□□□ 1.76
Ubr1O70481 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ubr1O70481 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ubr1O70481 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC26.06■■□□□ 1.76
Ubr1O70481 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ubr1O70481 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Ubr1O70481 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ubr1O70481 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ubr1O70481 AC154266.1-201ENSMUST00000223190 503 ntBASIC26.05■■□□□ 1.76
Ubr1O70481 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ubr1O70481 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ubr1O70481 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC26.04■■□□□ 1.76
Ubr1O70481 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ubr1O70481 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC26.04■■□□□ 1.76
Ubr1O70481 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ubr1O70481 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Ubr1O70481 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
Ubr1O70481 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
Ubr1O70481 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Ubr1O70481 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ubr1O70481 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Ubr1O70481 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ubr1O70481 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
Ubr1O70481 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC26.02■■□□□ 1.76
Ubr1O70481 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ubr1O70481 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ubr1O70481 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ubr1O70481 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ubr1O70481 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ubr1O70481 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ubr1O70481 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC26.01■■□□□ 1.75
Ubr1O70481 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
Ubr1O70481 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ubr1O70481 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC26■■□□□ 1.75
Ubr1O70481 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ubr1O70481 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ubr1O70481 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
Ubr1O70481 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC26■■□□□ 1.75
Ubr1O70481 Gm10602-201ENSMUST00000098239 609 ntBASIC26■■□□□ 1.75
Ubr1O70481 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC26■■□□□ 1.75
Ubr1O70481 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
Ubr1O70481 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ubr1O70481 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ubr1O70481 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ubr1O70481 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ubr1O70481 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
Ubr1O70481 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC25.99■■□□□ 1.75
Ubr1O70481 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ubr1O70481 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ubr1O70481 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ubr1O70481 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ubr1O70481 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ubr1O70481 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ubr1O70481 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC25.98■■□□□ 1.75
Ubr1O70481 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ubr1O70481 Gm12441-201ENSMUST00000121806 588 ntBASIC25.97■■□□□ 1.75
Ubr1O70481 Mir5133-201ENSMUST00000174955 77 ntBASIC25.97■■□□□ 1.75
Ubr1O70481 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC25.97■■□□□ 1.75
Ubr1O70481 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC25.97■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms