Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.69■□□□□ 0.58
Rdh5O55240 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.69■□□□□ 0.58
Rdh5O55240 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rdh5O55240 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rdh5O55240 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Rdh5O55240 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rdh5O55240 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rdh5O55240 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rdh5O55240 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rdh5O55240 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rdh5O55240 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rdh5O55240 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rdh5O55240 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.68■□□□□ 0.58
Rdh5O55240 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rdh5O55240 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.68■□□□□ 0.58
Rdh5O55240 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rdh5O55240 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.67■□□□□ 0.58
Rdh5O55240 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rdh5O55240 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rdh5O55240 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rdh5O55240 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rdh5O55240 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rdh5O55240 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.67■□□□□ 0.58
Rdh5O55240 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rdh5O55240 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.66■□□□□ 0.58
Rdh5O55240 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.66■□□□□ 0.58
Rdh5O55240 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.66■□□□□ 0.58
Rdh5O55240 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.66■□□□□ 0.58
Rdh5O55240 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rdh5O55240 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rdh5O55240 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rdh5O55240 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rdh5O55240 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rdh5O55240 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.65■□□□□ 0.58
Rdh5O55240 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rdh5O55240 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rdh5O55240 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rdh5O55240 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rdh5O55240 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rdh5O55240 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rdh5O55240 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rdh5O55240 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rdh5O55240 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rdh5O55240 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.64■□□□□ 0.57
Rdh5O55240 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rdh5O55240 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rdh5O55240 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh5O55240 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh5O55240 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh5O55240 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh5O55240 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rdh5O55240 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.63■□□□□ 0.57
Rdh5O55240 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh5O55240 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh5O55240 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh5O55240 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh5O55240 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh5O55240 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh5O55240 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Rdh5O55240 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh5O55240 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Rdh5O55240 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh5O55240 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.62■□□□□ 0.57
Rdh5O55240 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rdh5O55240 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rdh5O55240 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Rdh5O55240 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.62■□□□□ 0.57
Rdh5O55240 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.62■□□□□ 0.57
Rdh5O55240 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rdh5O55240 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rdh5O55240 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rdh5O55240 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rdh5O55240 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rdh5O55240 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rdh5O55240 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rdh5O55240 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rdh5O55240 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.61■□□□□ 0.57
Rdh5O55240 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.61■□□□□ 0.57
Rdh5O55240 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rdh5O55240 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Rdh5O55240 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rdh5O55240 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rdh5O55240 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rdh5O55240 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rdh5O55240 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rdh5O55240 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rdh5O55240 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rdh5O55240 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rdh5O55240 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rdh5O55240 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rdh5O55240 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rdh5O55240 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
Rdh5O55240 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rdh5O55240 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
Rdh5O55240 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rdh5O55240 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rdh5O55240 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rdh5O55240 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rdh5O55240 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rdh5O55240 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms