Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clk3O35492 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
Clk3O35492 Gm9870-201ENSMUST00000063874 645 ntBASIC18.69■□□□□ 0.58
Clk3O35492 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Clk3O35492 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.69■□□□□ 0.58
Clk3O35492 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clk3O35492 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Clk3O35492 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clk3O35492 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.68■□□□□ 0.58
Clk3O35492 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Clk3O35492 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clk3O35492 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clk3O35492 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.68■□□□□ 0.58
Clk3O35492 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clk3O35492 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clk3O35492 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clk3O35492 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clk3O35492 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clk3O35492 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clk3O35492 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.67■□□□□ 0.58
Clk3O35492 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clk3O35492 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clk3O35492 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Clk3O35492 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clk3O35492 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clk3O35492 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clk3O35492 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clk3O35492 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clk3O35492 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clk3O35492 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.66■□□□□ 0.58
Clk3O35492 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clk3O35492 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clk3O35492 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clk3O35492 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.66■□□□□ 0.58
Clk3O35492 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clk3O35492 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clk3O35492 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clk3O35492 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.65■□□□□ 0.58
Clk3O35492 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Clk3O35492 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clk3O35492 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.65■□□□□ 0.58
Clk3O35492 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.65■□□□□ 0.58
Clk3O35492 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clk3O35492 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clk3O35492 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clk3O35492 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Clk3O35492 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clk3O35492 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.64■□□□□ 0.58
Clk3O35492 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.64■□□□□ 0.58
Clk3O35492 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clk3O35492 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk3O35492 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clk3O35492 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.64■□□□□ 0.57
Clk3O35492 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clk3O35492 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.64■□□□□ 0.57
Clk3O35492 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Clk3O35492 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk3O35492 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk3O35492 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clk3O35492 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.64■□□□□ 0.57
Clk3O35492 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk3O35492 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk3O35492 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.63■□□□□ 0.57
Clk3O35492 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk3O35492 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk3O35492 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Clk3O35492 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.63■□□□□ 0.57
Clk3O35492 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
Clk3O35492 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk3O35492 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk3O35492 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clk3O35492 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Clk3O35492 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Clk3O35492 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.62■□□□□ 0.57
Clk3O35492 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.62■□□□□ 0.57
Clk3O35492 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clk3O35492 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clk3O35492 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.62■□□□□ 0.57
Clk3O35492 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Clk3O35492 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clk3O35492 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clk3O35492 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clk3O35492 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clk3O35492 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clk3O35492 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clk3O35492 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk3O35492 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk3O35492 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk3O35492 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.61■□□□□ 0.57
Clk3O35492 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk3O35492 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk3O35492 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.61■□□□□ 0.57
Clk3O35492 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.61■□□□□ 0.57
Clk3O35492 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clk3O35492 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk3O35492 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk3O35492 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Clk3O35492 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk3O35492 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clk3O35492 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms