Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.48■□□□□ 0.55
Cx3cl1O35188 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cx3cl1O35188 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cx3cl1O35188 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cx3cl1O35188 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cx3cl1O35188 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cx3cl1O35188 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cx3cl1O35188 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.47■□□□□ 0.55
Cx3cl1O35188 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cx3cl1O35188 Spcs1-204ENSMUST00000226782 949 ntBASIC18.47■□□□□ 0.55
Cx3cl1O35188 Gm6139-201ENSMUST00000079261 882 ntBASIC18.47■□□□□ 0.55
Cx3cl1O35188 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cx3cl1O35188 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cx3cl1O35188 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.47■□□□□ 0.55
Cx3cl1O35188 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cx3cl1O35188 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cx3cl1O35188 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cx3cl1O35188 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cx3cl1O35188 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Cx3cl1O35188 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cx3cl1O35188 Gm12251-201ENSMUST00000117893 792 ntBASIC18.46■□□□□ 0.55
Cx3cl1O35188 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cx3cl1O35188 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cx3cl1O35188 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cx3cl1O35188 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cx3cl1O35188 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cx3cl1O35188 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.54
Cx3cl1O35188 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cx3cl1O35188 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.45■□□□□ 0.54
Cx3cl1O35188 Gm8493-201ENSMUST00000196881 489 ntBASIC18.45■□□□□ 0.54
Cx3cl1O35188 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.45■□□□□ 0.54
Cx3cl1O35188 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cx3cl1O35188 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.45■□□□□ 0.54
Cx3cl1O35188 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cx3cl1O35188 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cx3cl1O35188 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cx3cl1O35188 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cx3cl1O35188 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cx3cl1O35188 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cx3cl1O35188 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cx3cl1O35188 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cx3cl1O35188 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cx3cl1O35188 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cx3cl1O35188 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cx3cl1O35188 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.44■□□□□ 0.54
Cx3cl1O35188 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cx3cl1O35188 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cx3cl1O35188 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cx3cl1O35188 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cx3cl1O35188 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cx3cl1O35188 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Cx3cl1O35188 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cx3cl1O35188 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cx3cl1O35188 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cx3cl1O35188 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cx3cl1O35188 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cx3cl1O35188 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.43■□□□□ 0.54
Cx3cl1O35188 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cx3cl1O35188 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cx3cl1O35188 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Cx3cl1O35188 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cx3cl1O35188 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cx3cl1O35188 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cx3cl1O35188 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cx3cl1O35188 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cx3cl1O35188 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cx3cl1O35188 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cx3cl1O35188 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cx3cl1O35188 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cx3cl1O35188 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cx3cl1O35188 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cx3cl1O35188 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.42■□□□□ 0.54
Cx3cl1O35188 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cx3cl1O35188 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cx3cl1O35188 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cx3cl1O35188 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cx3cl1O35188 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cx3cl1O35188 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cx3cl1O35188 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cx3cl1O35188 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cx3cl1O35188 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cx3cl1O35188 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.41■□□□□ 0.54
Cx3cl1O35188 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cx3cl1O35188 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.41■□□□□ 0.54
Cx3cl1O35188 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cx3cl1O35188 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.41■□□□□ 0.54
Cx3cl1O35188 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cx3cl1O35188 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cx3cl1O35188 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cx3cl1O35188 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cx3cl1O35188 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cx3cl1O35188 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cx3cl1O35188 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cx3cl1O35188 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cx3cl1O35188 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.4■□□□□ 0.54
Cx3cl1O35188 Gm43173-201ENSMUST00000202246 593 ntBASIC18.4■□□□□ 0.54
Cx3cl1O35188 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cx3cl1O35188 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cx3cl1O35188 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cx3cl1O35188 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.39■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms