Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trove2O08848 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trove2O08848 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trove2O08848 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trove2O08848 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trove2O08848 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trove2O08848 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trove2O08848 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trove2O08848 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trove2O08848 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trove2O08848 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.11■□□□□ 0.81
Trove2O08848 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trove2O08848 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trove2O08848 Gm10399-202ENSMUST00000202768 748 ntBASIC20.11■□□□□ 0.81
Trove2O08848 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trove2O08848 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trove2O08848 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trove2O08848 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trove2O08848 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trove2O08848 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trove2O08848 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trove2O08848 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trove2O08848 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Trove2O08848 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trove2O08848 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trove2O08848 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trove2O08848 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trove2O08848 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trove2O08848 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trove2O08848 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trove2O08848 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.1■□□□□ 0.81
Trove2O08848 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.1■□□□□ 0.81
Trove2O08848 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Trove2O08848 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trove2O08848 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trove2O08848 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trove2O08848 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trove2O08848 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trove2O08848 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trove2O08848 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trove2O08848 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.09■□□□□ 0.81
Trove2O08848 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.09■□□□□ 0.81
Trove2O08848 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trove2O08848 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Trove2O08848 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trove2O08848 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trove2O08848 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trove2O08848 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trove2O08848 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trove2O08848 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trove2O08848 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Trove2O08848 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trove2O08848 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trove2O08848 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.08■□□□□ 0.81
Trove2O08848 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trove2O08848 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.08■□□□□ 0.81
Trove2O08848 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Trove2O08848 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trove2O08848 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trove2O08848 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trove2O08848 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.08■□□□□ 0.8
Trove2O08848 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trove2O08848 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trove2O08848 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trove2O08848 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trove2O08848 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trove2O08848 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.07■□□□□ 0.8
Trove2O08848 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trove2O08848 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.07■□□□□ 0.8
Trove2O08848 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.07■□□□□ 0.8
Trove2O08848 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trove2O08848 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trove2O08848 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trove2O08848 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trove2O08848 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trove2O08848 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trove2O08848 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trove2O08848 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trove2O08848 Gm15820-201ENSMUST00000201566 728 ntBASIC20.06■□□□□ 0.8
Trove2O08848 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trove2O08848 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trove2O08848 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trove2O08848 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trove2O08848 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Trove2O08848 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trove2O08848 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.05■□□□□ 0.8
Trove2O08848 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trove2O08848 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trove2O08848 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trove2O08848 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trove2O08848 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trove2O08848 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trove2O08848 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trove2O08848 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trove2O08848 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trove2O08848 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.04■□□□□ 0.8
Trove2O08848 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trove2O08848 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trove2O08848 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.04■□□□□ 0.8
Trove2O08848 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms