Protein–RNA interactions for Protein: O08842

Gfra2, GDNF family receptor alpha-2, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra2O08842 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.29■□□□□ 0.84
Gfra2O08842 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gfra2O08842 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gfra2O08842 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gfra2O08842 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gfra2O08842 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gfra2O08842 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gfra2O08842 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gfra2O08842 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gfra2O08842 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gfra2O08842 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gfra2O08842 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.28■□□□□ 0.84
Gfra2O08842 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gfra2O08842 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Gfra2O08842 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Gfra2O08842 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.27■□□□□ 0.84
Gfra2O08842 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.27■□□□□ 0.84
Gfra2O08842 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.27■□□□□ 0.84
Gfra2O08842 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
Gfra2O08842 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.27■□□□□ 0.84
Gfra2O08842 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gfra2O08842 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gfra2O08842 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gfra2O08842 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Gfra2O08842 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gfra2O08842 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Gfra2O08842 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Gfra2O08842 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Gfra2O08842 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gfra2O08842 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gfra2O08842 Gm26571-201ENSMUST00000181399 666 ntBASIC20.26■□□□□ 0.83
Gfra2O08842 Gm27801-201ENSMUST00000184174 223 ntBASIC20.26■□□□□ 0.83
Gfra2O08842 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gfra2O08842 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.26■□□□□ 0.83
Gfra2O08842 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gfra2O08842 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gfra2O08842 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gfra2O08842 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gfra2O08842 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.25■□□□□ 0.83
Gfra2O08842 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.25■□□□□ 0.83
Gfra2O08842 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Gfra2O08842 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gfra2O08842 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gfra2O08842 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.25■□□□□ 0.83
Gfra2O08842 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gfra2O08842 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.24■□□□□ 0.83
Gfra2O08842 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gfra2O08842 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.24■□□□□ 0.83
Gfra2O08842 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Gfra2O08842 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gfra2O08842 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Gfra2O08842 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gfra2O08842 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gfra2O08842 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gfra2O08842 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Gfra2O08842 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.24■□□□□ 0.83
Gfra2O08842 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gfra2O08842 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.24■□□□□ 0.83
Gfra2O08842 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gfra2O08842 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gfra2O08842 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gfra2O08842 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gfra2O08842 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Gfra2O08842 Gm10033-202ENSMUST00000211874 928 ntBASIC20.23■□□□□ 0.83
Gfra2O08842 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.23■□□□□ 0.83
Gfra2O08842 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Gfra2O08842 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gfra2O08842 AA386476-201ENSMUST00000098781 1665 ntBASIC20.22■□□□□ 0.83
Gfra2O08842 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gfra2O08842 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Gfra2O08842 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gfra2O08842 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gfra2O08842 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gfra2O08842 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.22■□□□□ 0.83
Gfra2O08842 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gfra2O08842 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.22■□□□□ 0.83
Gfra2O08842 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gfra2O08842 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gfra2O08842 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gfra2O08842 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gfra2O08842 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gfra2O08842 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gfra2O08842 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gfra2O08842 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gfra2O08842 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.21■□□□□ 0.83
Gfra2O08842 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gfra2O08842 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.21■□□□□ 0.83
Gfra2O08842 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.21■□□□□ 0.83
Gfra2O08842 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.21■□□□□ 0.83
Gfra2O08842 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gfra2O08842 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gfra2O08842 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.21■□□□□ 0.83
Gfra2O08842 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gfra2O08842 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gfra2O08842 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gfra2O08842 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Gfra2O08842 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Gfra2O08842 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gfra2O08842 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.19■□□□□ 0.82
Gfra2O08842 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms