Protein–RNA interactions for Protein: F6R3J9

Gm8879, Predicted gene 8879, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm8879F6R3J9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm8879F6R3J9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm8879F6R3J9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm8879F6R3J9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm8879F6R3J9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm8879F6R3J9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.83■□□□□ 0.61
Gm8879F6R3J9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm8879F6R3J9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm8879F6R3J9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm8879F6R3J9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm8879F6R3J9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm8879F6R3J9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.82■□□□□ 0.6
Gm8879F6R3J9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Gm8879F6R3J9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm8879F6R3J9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm8879F6R3J9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm8879F6R3J9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm8879F6R3J9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.82■□□□□ 0.6
Gm8879F6R3J9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm8879F6R3J9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm8879F6R3J9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm8879F6R3J9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm8879F6R3J9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm8879F6R3J9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm8879F6R3J9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm8879F6R3J9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm8879F6R3J9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Gm8879F6R3J9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Gm8879F6R3J9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm8879F6R3J9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm8879F6R3J9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm8879F6R3J9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm8879F6R3J9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm8879F6R3J9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm8879F6R3J9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm8879F6R3J9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm8879F6R3J9 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.8■□□□□ 0.6
Gm8879F6R3J9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Gm8879F6R3J9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm8879F6R3J9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm8879F6R3J9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm8879F6R3J9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm8879F6R3J9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm8879F6R3J9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm8879F6R3J9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm8879F6R3J9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm8879F6R3J9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm8879F6R3J9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gm8879F6R3J9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm8879F6R3J9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm8879F6R3J9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm8879F6R3J9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm8879F6R3J9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gm8879F6R3J9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.79■□□□□ 0.6
Gm8879F6R3J9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Gm8879F6R3J9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm8879F6R3J9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm8879F6R3J9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm8879F6R3J9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm8879F6R3J9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm8879F6R3J9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm8879F6R3J9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.78■□□□□ 0.6
Gm8879F6R3J9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.78■□□□□ 0.6
Gm8879F6R3J9 Gm40881-201ENSMUST00000223397 166 ntBASIC18.78■□□□□ 0.6
Gm8879F6R3J9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Gm8879F6R3J9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm8879F6R3J9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm8879F6R3J9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm8879F6R3J9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm8879F6R3J9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm8879F6R3J9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm8879F6R3J9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm8879F6R3J9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm8879F6R3J9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm8879F6R3J9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm8879F6R3J9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm8879F6R3J9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm8879F6R3J9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.77■□□□□ 0.6
Gm8879F6R3J9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.77■□□□□ 0.6
Gm8879F6R3J9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Gm8879F6R3J9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm8879F6R3J9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm8879F6R3J9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm8879F6R3J9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm8879F6R3J9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm8879F6R3J9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm8879F6R3J9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Gm8879F6R3J9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm8879F6R3J9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Gm8879F6R3J9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Gm8879F6R3J9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm8879F6R3J9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.76■□□□□ 0.59
Gm8879F6R3J9 Mir6236-201ENSMUST00000184437 123 ntBASIC18.76■□□□□ 0.59
Gm8879F6R3J9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.76■□□□□ 0.59
Gm8879F6R3J9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Gm8879F6R3J9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.75■□□□□ 0.59
Gm8879F6R3J9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm8879F6R3J9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm8879F6R3J9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.75■□□□□ 0.59
Gm8879F6R3J9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms